Protein–RNA interactions for Protein: Q9H9Z2

LIN28A, Protein lin-28 homolog A, humanhuman

Known RBP Predictions only

Length 209 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIN28AQ9H9Z2 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC18.4■□□□□ 0.54
LIN28AQ9H9Z2 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC18.4■□□□□ 0.54
LIN28AQ9H9Z2 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC18.4■□□□□ 0.54
LIN28AQ9H9Z2 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC18.4■□□□□ 0.54
LIN28AQ9H9Z2 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
LIN28AQ9H9Z2 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
LIN28AQ9H9Z2 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC18.4■□□□□ 0.54
LIN28AQ9H9Z2 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
LIN28AQ9H9Z2 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
LIN28AQ9H9Z2 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
LIN28AQ9H9Z2 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
LIN28AQ9H9Z2 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.54
LIN28AQ9H9Z2 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.54
LIN28AQ9H9Z2 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
LIN28AQ9H9Z2 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
LIN28AQ9H9Z2 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
LIN28AQ9H9Z2 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC18.39■□□□□ 0.53
LIN28AQ9H9Z2 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
LIN28AQ9H9Z2 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
LIN28AQ9H9Z2 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
LIN28AQ9H9Z2 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
LIN28AQ9H9Z2 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
LIN28AQ9H9Z2 ISG20-202ENST00000379224 540 ntTSL 3 BASIC18.39■□□□□ 0.53
LIN28AQ9H9Z2 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
LIN28AQ9H9Z2 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
LIN28AQ9H9Z2 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC18.39■□□□□ 0.53
LIN28AQ9H9Z2 Six3os1_6.1-201ENST00000620790 196 ntBASIC18.39■□□□□ 0.53
LIN28AQ9H9Z2 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
LIN28AQ9H9Z2 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC18.39■□□□□ 0.53
LIN28AQ9H9Z2 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
LIN28AQ9H9Z2 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
LIN28AQ9H9Z2 KRT16P6-202ENST00000425692 1426 ntBASIC18.39■□□□□ 0.53
LIN28AQ9H9Z2 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
LIN28AQ9H9Z2 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC18.39■□□□□ 0.53
LIN28AQ9H9Z2 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC18.39■□□□□ 0.53
LIN28AQ9H9Z2 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
LIN28AQ9H9Z2 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
LIN28AQ9H9Z2 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
LIN28AQ9H9Z2 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC18.38■□□□□ 0.53
LIN28AQ9H9Z2 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
LIN28AQ9H9Z2 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC18.38■□□□□ 0.53
LIN28AQ9H9Z2 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
LIN28AQ9H9Z2 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
LIN28AQ9H9Z2 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC18.38■□□□□ 0.53
LIN28AQ9H9Z2 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
LIN28AQ9H9Z2 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
LIN28AQ9H9Z2 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
LIN28AQ9H9Z2 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
LIN28AQ9H9Z2 SERF2-207ENST00000409614 582 ntTSL 2 BASIC18.38■□□□□ 0.53
LIN28AQ9H9Z2 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC18.38■□□□□ 0.53
LIN28AQ9H9Z2 AC239809.2-201ENST00000415381 517 ntBASIC18.38■□□□□ 0.53
LIN28AQ9H9Z2 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
LIN28AQ9H9Z2 RNF121-214ENST00000533380 870 ntTSL 3 BASIC18.38■□□□□ 0.53
LIN28AQ9H9Z2 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC18.38■□□□□ 0.53
LIN28AQ9H9Z2 AC124016.1-201ENST00000609552 612 ntBASIC18.38■□□□□ 0.53
LIN28AQ9H9Z2 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
LIN28AQ9H9Z2 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC18.38■□□□□ 0.53
LIN28AQ9H9Z2 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
LIN28AQ9H9Z2 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
LIN28AQ9H9Z2 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC18.38■□□□□ 0.53
LIN28AQ9H9Z2 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
LIN28AQ9H9Z2 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC18.38■□□□□ 0.53
LIN28AQ9H9Z2 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
LIN28AQ9H9Z2 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
LIN28AQ9H9Z2 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC18.38■□□□□ 0.53
LIN28AQ9H9Z2 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
LIN28AQ9H9Z2 BX119927.1-201ENST00000636596 1552 ntBASIC18.38■□□□□ 0.53
LIN28AQ9H9Z2 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
LIN28AQ9H9Z2 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC18.38■□□□□ 0.53
LIN28AQ9H9Z2 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
LIN28AQ9H9Z2 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
LIN28AQ9H9Z2 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC18.37■□□□□ 0.53
LIN28AQ9H9Z2 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC18.37■□□□□ 0.53
LIN28AQ9H9Z2 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
LIN28AQ9H9Z2 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC18.37■□□□□ 0.53
LIN28AQ9H9Z2 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
LIN28AQ9H9Z2 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC18.37■□□□□ 0.53
LIN28AQ9H9Z2 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
LIN28AQ9H9Z2 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC18.37■□□□□ 0.53
LIN28AQ9H9Z2 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
LIN28AQ9H9Z2 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC18.37■□□□□ 0.53
LIN28AQ9H9Z2 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
LIN28AQ9H9Z2 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC18.37■□□□□ 0.53
LIN28AQ9H9Z2 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC18.37■□□□□ 0.53
LIN28AQ9H9Z2 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC18.37■□□□□ 0.53
LIN28AQ9H9Z2 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
LIN28AQ9H9Z2 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC18.37■□□□□ 0.53
LIN28AQ9H9Z2 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC18.37■□□□□ 0.53
LIN28AQ9H9Z2 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
LIN28AQ9H9Z2 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC18.37■□□□□ 0.53
LIN28AQ9H9Z2 AC020916.1-201ENST00000587762 1774 ntBASIC18.37■□□□□ 0.53
LIN28AQ9H9Z2 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
LIN28AQ9H9Z2 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
LIN28AQ9H9Z2 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC18.37■□□□□ 0.53
LIN28AQ9H9Z2 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC18.37■□□□□ 0.53
LIN28AQ9H9Z2 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
LIN28AQ9H9Z2 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
LIN28AQ9H9Z2 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
LIN28AQ9H9Z2 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
LIN28AQ9H9Z2 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms