Protein–RNA interactions for Protein: Q9H4D5

NXF3, Nuclear RNA export factor 3, humanhuman

Known RBP Predictions only

Length 531 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NXF3Q9H4D5 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
NXF3Q9H4D5 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC20.71■□□□□ 0.91
NXF3Q9H4D5 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC20.71■□□□□ 0.91
NXF3Q9H4D5 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
NXF3Q9H4D5 BID-204ENST00000399767 2129 ntTSL 2 BASIC20.71■□□□□ 0.91
NXF3Q9H4D5 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
NXF3Q9H4D5 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC20.7■□□□□ 0.91
NXF3Q9H4D5 KRT8P45-201ENST00000414328 1447 ntBASIC20.7■□□□□ 0.9
NXF3Q9H4D5 AL158211.5-201ENST00000623583 2518 ntBASIC20.7■□□□□ 0.9
NXF3Q9H4D5 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC20.7■□□□□ 0.9
NXF3Q9H4D5 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
NXF3Q9H4D5 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
NXF3Q9H4D5 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC20.7■□□□□ 0.9
NXF3Q9H4D5 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
NXF3Q9H4D5 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC20.7■□□□□ 0.9
NXF3Q9H4D5 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC20.7■□□□□ 0.9
NXF3Q9H4D5 AFG3L1P-217ENST00000557444 2447 ntBASIC20.7■□□□□ 0.9
NXF3Q9H4D5 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC20.7■□□□□ 0.9
NXF3Q9H4D5 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
NXF3Q9H4D5 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
NXF3Q9H4D5 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC20.7■□□□□ 0.9
NXF3Q9H4D5 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC20.7■□□□□ 0.9
NXF3Q9H4D5 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
NXF3Q9H4D5 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
NXF3Q9H4D5 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
NXF3Q9H4D5 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
NXF3Q9H4D5 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
NXF3Q9H4D5 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
NXF3Q9H4D5 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC20.69■□□□□ 0.9
NXF3Q9H4D5 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC20.69■□□□□ 0.9
NXF3Q9H4D5 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
NXF3Q9H4D5 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
NXF3Q9H4D5 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
NXF3Q9H4D5 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC20.69■□□□□ 0.9
NXF3Q9H4D5 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
NXF3Q9H4D5 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
NXF3Q9H4D5 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
NXF3Q9H4D5 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC20.69■□□□□ 0.9
NXF3Q9H4D5 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
NXF3Q9H4D5 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
NXF3Q9H4D5 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC20.69■□□□□ 0.9
NXF3Q9H4D5 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC20.69■□□□□ 0.9
NXF3Q9H4D5 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC20.69■□□□□ 0.9
NXF3Q9H4D5 NT5C-211ENST00000582170 653 ntTSL 3 BASIC20.69■□□□□ 0.9
NXF3Q9H4D5 MIR4674-201ENST00000582457 87 ntBASIC20.69■□□□□ 0.9
NXF3Q9H4D5 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
NXF3Q9H4D5 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
NXF3Q9H4D5 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
NXF3Q9H4D5 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
NXF3Q9H4D5 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
NXF3Q9H4D5 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
NXF3Q9H4D5 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
NXF3Q9H4D5 Z82202.1-201ENST00000623446 1880 ntBASIC20.69■□□□□ 0.9
NXF3Q9H4D5 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
NXF3Q9H4D5 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
NXF3Q9H4D5 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
NXF3Q9H4D5 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
NXF3Q9H4D5 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
NXF3Q9H4D5 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
NXF3Q9H4D5 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC20.68■□□□□ 0.9
NXF3Q9H4D5 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
NXF3Q9H4D5 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
NXF3Q9H4D5 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
NXF3Q9H4D5 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC20.68■□□□□ 0.9
NXF3Q9H4D5 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
NXF3Q9H4D5 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
NXF3Q9H4D5 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
NXF3Q9H4D5 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
NXF3Q9H4D5 BUB3-202ENST00000368859 667 ntTSL 3 BASIC20.68■□□□□ 0.9
NXF3Q9H4D5 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
NXF3Q9H4D5 YBX1P2-201ENST00000489612 999 ntBASIC20.68■□□□□ 0.9
NXF3Q9H4D5 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
NXF3Q9H4D5 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC20.68■□□□□ 0.9
NXF3Q9H4D5 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC20.68■□□□□ 0.9
NXF3Q9H4D5 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
NXF3Q9H4D5 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
NXF3Q9H4D5 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC20.68■□□□□ 0.9
NXF3Q9H4D5 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
NXF3Q9H4D5 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC20.67■□□□□ 0.9
NXF3Q9H4D5 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC20.67■□□□□ 0.9
NXF3Q9H4D5 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
NXF3Q9H4D5 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
NXF3Q9H4D5 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC20.67■□□□□ 0.9
NXF3Q9H4D5 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
NXF3Q9H4D5 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
NXF3Q9H4D5 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
NXF3Q9H4D5 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC20.67■□□□□ 0.9
NXF3Q9H4D5 AC022616.7-201ENST00000525383 220 ntBASIC20.67■□□□□ 0.9
NXF3Q9H4D5 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC20.67■□□□□ 0.9
NXF3Q9H4D5 LTBR-211ENST00000543190 785 ntTSL 3 BASIC20.67■□□□□ 0.9
NXF3Q9H4D5 RMI2-205ENST00000576027 818 ntTSL 2 BASIC20.67■□□□□ 0.9
NXF3Q9H4D5 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC20.67■□□□□ 0.9
NXF3Q9H4D5 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC20.67■□□□□ 0.9
NXF3Q9H4D5 GAS2L1P1-201ENST00000420145 1480 ntBASIC20.67■□□□□ 0.9
NXF3Q9H4D5 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC20.67■□□□□ 0.9
NXF3Q9H4D5 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
NXF3Q9H4D5 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
NXF3Q9H4D5 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC20.67■□□□□ 0.9
NXF3Q9H4D5 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
NXF3Q9H4D5 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms