Protein–RNA interactions for Protein: Q9BZS1

FOXP3, Forkhead box protein P3, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXP3Q9BZS1 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
FOXP3Q9BZS1 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC19.76■□□□□ 0.75
FOXP3Q9BZS1 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC19.76■□□□□ 0.75
FOXP3Q9BZS1 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC19.76■□□□□ 0.75
FOXP3Q9BZS1 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
FOXP3Q9BZS1 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
FOXP3Q9BZS1 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
FOXP3Q9BZS1 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
FOXP3Q9BZS1 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC19.76■□□□□ 0.75
FOXP3Q9BZS1 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC19.76■□□□□ 0.75
FOXP3Q9BZS1 AC005082.1-201ENST00000413042 2259 ntBASIC19.76■□□□□ 0.75
FOXP3Q9BZS1 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC19.76■□□□□ 0.75
FOXP3Q9BZS1 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC19.75■□□□□ 0.75
FOXP3Q9BZS1 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
FOXP3Q9BZS1 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
FOXP3Q9BZS1 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
FOXP3Q9BZS1 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
FOXP3Q9BZS1 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
FOXP3Q9BZS1 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
FOXP3Q9BZS1 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
FOXP3Q9BZS1 RNF121-214ENST00000533380 870 ntTSL 3 BASIC19.75■□□□□ 0.75
FOXP3Q9BZS1 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC19.75■□□□□ 0.75
FOXP3Q9BZS1 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
FOXP3Q9BZS1 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC19.75■□□□□ 0.75
FOXP3Q9BZS1 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC19.75■□□□□ 0.75
FOXP3Q9BZS1 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
FOXP3Q9BZS1 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC19.75■□□□□ 0.75
FOXP3Q9BZS1 ANKRD18DP-204ENST00000455355 1975 ntBASIC19.75■□□□□ 0.75
FOXP3Q9BZS1 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
FOXP3Q9BZS1 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC19.75■□□□□ 0.75
FOXP3Q9BZS1 AIRN-201ENST00000601203 4374 ntBASIC19.75■□□□□ 0.75
FOXP3Q9BZS1 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
FOXP3Q9BZS1 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
FOXP3Q9BZS1 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
FOXP3Q9BZS1 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC19.75■□□□□ 0.75
FOXP3Q9BZS1 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
FOXP3Q9BZS1 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
FOXP3Q9BZS1 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
FOXP3Q9BZS1 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
FOXP3Q9BZS1 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC19.74■□□□□ 0.75
FOXP3Q9BZS1 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC19.74■□□□□ 0.75
FOXP3Q9BZS1 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
FOXP3Q9BZS1 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
FOXP3Q9BZS1 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
FOXP3Q9BZS1 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
FOXP3Q9BZS1 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
FOXP3Q9BZS1 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
FOXP3Q9BZS1 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
FOXP3Q9BZS1 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC19.74■□□□□ 0.75
FOXP3Q9BZS1 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC19.74■□□□□ 0.75
FOXP3Q9BZS1 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC19.74■□□□□ 0.75
FOXP3Q9BZS1 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
FOXP3Q9BZS1 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
FOXP3Q9BZS1 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
FOXP3Q9BZS1 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
FOXP3Q9BZS1 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC19.74■□□□□ 0.75
FOXP3Q9BZS1 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC19.74■□□□□ 0.75
FOXP3Q9BZS1 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
FOXP3Q9BZS1 FP475955.4-201ENST00000623131 1990 ntBASIC19.74■□□□□ 0.75
FOXP3Q9BZS1 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC19.74■□□□□ 0.75
FOXP3Q9BZS1 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
FOXP3Q9BZS1 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
FOXP3Q9BZS1 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC19.73■□□□□ 0.75
FOXP3Q9BZS1 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
FOXP3Q9BZS1 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
FOXP3Q9BZS1 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC19.73■□□□□ 0.75
FOXP3Q9BZS1 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC19.73■□□□□ 0.75
FOXP3Q9BZS1 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
FOXP3Q9BZS1 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
FOXP3Q9BZS1 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
FOXP3Q9BZS1 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC19.73■□□□□ 0.75
FOXP3Q9BZS1 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
FOXP3Q9BZS1 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
FOXP3Q9BZS1 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
FOXP3Q9BZS1 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
FOXP3Q9BZS1 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC19.73■□□□□ 0.75
FOXP3Q9BZS1 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
FOXP3Q9BZS1 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC19.73■□□□□ 0.75
FOXP3Q9BZS1 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC19.73■□□□□ 0.75
FOXP3Q9BZS1 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC19.73■□□□□ 0.75
FOXP3Q9BZS1 AC069544.1-201ENST00000609399 999 ntBASIC19.73■□□□□ 0.75
FOXP3Q9BZS1 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC19.73■□□□□ 0.75
FOXP3Q9BZS1 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC19.73■□□□□ 0.75
FOXP3Q9BZS1 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
FOXP3Q9BZS1 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
FOXP3Q9BZS1 AC090164.3-201ENST00000610780 2143 ntBASIC19.73■□□□□ 0.75
FOXP3Q9BZS1 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
FOXP3Q9BZS1 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
FOXP3Q9BZS1 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
FOXP3Q9BZS1 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
FOXP3Q9BZS1 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC19.73■□□□□ 0.75
FOXP3Q9BZS1 AC104417.2-201ENST00000562989 1793 ntBASIC19.72■□□□□ 0.75
FOXP3Q9BZS1 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
FOXP3Q9BZS1 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
FOXP3Q9BZS1 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
FOXP3Q9BZS1 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
FOXP3Q9BZS1 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
FOXP3Q9BZS1 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
FOXP3Q9BZS1 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
FOXP3Q9BZS1 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms