Protein–RNA interactions for Protein: Q9BXY4

RSPO3, R-spondin-3, humanhuman

Predicted RBP Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO3Q9BXY4 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.62■□□□□ 0.41
RSPO3Q9BXY4 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC17.62■□□□□ 0.41
RSPO3Q9BXY4 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.62■□□□□ 0.41
RSPO3Q9BXY4 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
RSPO3Q9BXY4 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC17.62■□□□□ 0.41
RSPO3Q9BXY4 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC17.62■□□□□ 0.41
RSPO3Q9BXY4 AC026366.1-201ENST00000488803 879 ntBASIC17.62■□□□□ 0.41
RSPO3Q9BXY4 MMAB-206ENST00000540016 945 ntTSL 3 BASIC17.62■□□□□ 0.41
RSPO3Q9BXY4 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC17.62■□□□□ 0.41
RSPO3Q9BXY4 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC17.62■□□□□ 0.41
RSPO3Q9BXY4 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
RSPO3Q9BXY4 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC17.62■□□□□ 0.41
RSPO3Q9BXY4 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RSPO3Q9BXY4 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
RSPO3Q9BXY4 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RSPO3Q9BXY4 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC17.61■□□□□ 0.41
RSPO3Q9BXY4 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC17.61■□□□□ 0.41
RSPO3Q9BXY4 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RSPO3Q9BXY4 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RSPO3Q9BXY4 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC17.61■□□□□ 0.41
RSPO3Q9BXY4 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
RSPO3Q9BXY4 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC17.61■□□□□ 0.41
RSPO3Q9BXY4 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC17.61■□□□□ 0.41
RSPO3Q9BXY4 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RSPO3Q9BXY4 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RSPO3Q9BXY4 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
RSPO3Q9BXY4 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
RSPO3Q9BXY4 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RSPO3Q9BXY4 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
RSPO3Q9BXY4 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
RSPO3Q9BXY4 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC17.61■□□□□ 0.41
RSPO3Q9BXY4 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
RSPO3Q9BXY4 AL160286.2-201ENST00000567150 934 ntBASIC17.61■□□□□ 0.41
RSPO3Q9BXY4 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC17.61■□□□□ 0.41
RSPO3Q9BXY4 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC17.61■□□□□ 0.41
RSPO3Q9BXY4 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC17.61■□□□□ 0.41
RSPO3Q9BXY4 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
RSPO3Q9BXY4 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
RSPO3Q9BXY4 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
RSPO3Q9BXY4 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
RSPO3Q9BXY4 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
RSPO3Q9BXY4 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RSPO3Q9BXY4 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC17.61■□□□□ 0.41
RSPO3Q9BXY4 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RSPO3Q9BXY4 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RSPO3Q9BXY4 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RSPO3Q9BXY4 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RSPO3Q9BXY4 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC17.6■□□□□ 0.41
RSPO3Q9BXY4 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
RSPO3Q9BXY4 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC17.6■□□□□ 0.41
RSPO3Q9BXY4 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
RSPO3Q9BXY4 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RSPO3Q9BXY4 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
RSPO3Q9BXY4 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC17.6■□□□□ 0.41
RSPO3Q9BXY4 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC17.6■□□□□ 0.41
RSPO3Q9BXY4 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC17.6■□□□□ 0.41
RSPO3Q9BXY4 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC17.6■□□□□ 0.41
RSPO3Q9BXY4 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
RSPO3Q9BXY4 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC17.6■□□□□ 0.41
RSPO3Q9BXY4 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC17.6■□□□□ 0.41
RSPO3Q9BXY4 AL023875.1-201ENST00000640777 796 ntBASIC17.6■□□□□ 0.41
RSPO3Q9BXY4 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RSPO3Q9BXY4 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC17.6■□□□□ 0.41
RSPO3Q9BXY4 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
RSPO3Q9BXY4 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
RSPO3Q9BXY4 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
RSPO3Q9BXY4 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC17.6■□□□□ 0.41
RSPO3Q9BXY4 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC17.6■□□□□ 0.41
RSPO3Q9BXY4 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
RSPO3Q9BXY4 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
RSPO3Q9BXY4 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC17.6■□□□□ 0.41
RSPO3Q9BXY4 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
RSPO3Q9BXY4 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RSPO3Q9BXY4 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC17.6■□□□□ 0.41
RSPO3Q9BXY4 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RSPO3Q9BXY4 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RSPO3Q9BXY4 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC17.59■□□□□ 0.41
RSPO3Q9BXY4 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RSPO3Q9BXY4 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RSPO3Q9BXY4 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RSPO3Q9BXY4 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
RSPO3Q9BXY4 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC17.59■□□□□ 0.41
RSPO3Q9BXY4 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
RSPO3Q9BXY4 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC17.59■□□□□ 0.41
RSPO3Q9BXY4 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RSPO3Q9BXY4 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
RSPO3Q9BXY4 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC17.59■□□□□ 0.41
RSPO3Q9BXY4 Z85996.1-201ENST00000494644 937 ntBASIC17.59■□□□□ 0.41
RSPO3Q9BXY4 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC17.59■□□□□ 0.41
RSPO3Q9BXY4 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
RSPO3Q9BXY4 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
RSPO3Q9BXY4 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC17.59■□□□□ 0.41
RSPO3Q9BXY4 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC17.59■□□□□ 0.41
RSPO3Q9BXY4 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
RSPO3Q9BXY4 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC17.59■□□□□ 0.41
RSPO3Q9BXY4 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
RSPO3Q9BXY4 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
RSPO3Q9BXY4 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RSPO3Q9BXY4 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
RSPO3Q9BXY4 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms