Protein–RNA interactions for Protein: Q99958

FOXC2, Forkhead box protein C2, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXC2Q99958 KRT8P41-201ENST00000533985 1514 ntBASIC16.12■□□□□ 0.17
FOXC2Q99958 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
FOXC2Q99958 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
FOXC2Q99958 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC16.12■□□□□ 0.17
FOXC2Q99958 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC16.12■□□□□ 0.17
FOXC2Q99958 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC16.12■□□□□ 0.17
FOXC2Q99958 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
FOXC2Q99958 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC16.11■□□□□ 0.17
FOXC2Q99958 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC16.11■□□□□ 0.17
FOXC2Q99958 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC16.11■□□□□ 0.17
FOXC2Q99958 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
FOXC2Q99958 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
FOXC2Q99958 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
FOXC2Q99958 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
FOXC2Q99958 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
FOXC2Q99958 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
FOXC2Q99958 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC16.11■□□□□ 0.17
FOXC2Q99958 CHCHD2P8-201ENST00000429873 447 ntBASIC16.11■□□□□ 0.17
FOXC2Q99958 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC16.11■□□□□ 0.17
FOXC2Q99958 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC16.11■□□□□ 0.17
FOXC2Q99958 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC16.11■□□□□ 0.17
FOXC2Q99958 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC16.11■□□□□ 0.17
FOXC2Q99958 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC16.11■□□□□ 0.17
FOXC2Q99958 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC16.11■□□□□ 0.17
FOXC2Q99958 AC139530.3-201ENST00000620344 690 ntBASIC16.11■□□□□ 0.17
FOXC2Q99958 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC16.11■□□□□ 0.17
FOXC2Q99958 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
FOXC2Q99958 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
FOXC2Q99958 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
FOXC2Q99958 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
FOXC2Q99958 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC16.11■□□□□ 0.17
FOXC2Q99958 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
FOXC2Q99958 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
FOXC2Q99958 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC16.11■□□□□ 0.17
FOXC2Q99958 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC16.11■□□□□ 0.17
FOXC2Q99958 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC16.1■□□□□ 0.17
FOXC2Q99958 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
FOXC2Q99958 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
FOXC2Q99958 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC16.1■□□□□ 0.17
FOXC2Q99958 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
FOXC2Q99958 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
FOXC2Q99958 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
FOXC2Q99958 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
FOXC2Q99958 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
FOXC2Q99958 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
FOXC2Q99958 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
FOXC2Q99958 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC16.1■□□□□ 0.17
FOXC2Q99958 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
FOXC2Q99958 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC16.1■□□□□ 0.17
FOXC2Q99958 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
FOXC2Q99958 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC16.1■□□□□ 0.17
FOXC2Q99958 AC079781.3-201ENST00000449110 356 ntBASIC16.1■□□□□ 0.17
FOXC2Q99958 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
FOXC2Q99958 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
FOXC2Q99958 AL732292.2-201ENST00000609649 430 ntBASIC16.1■□□□□ 0.17
FOXC2Q99958 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
FOXC2Q99958 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC16.1■□□□□ 0.17
FOXC2Q99958 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
FOXC2Q99958 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
FOXC2Q99958 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
FOXC2Q99958 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
FOXC2Q99958 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC16.1■□□□□ 0.17
FOXC2Q99958 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC16.1■□□□□ 0.17
FOXC2Q99958 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
FOXC2Q99958 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
FOXC2Q99958 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
FOXC2Q99958 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
FOXC2Q99958 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC16.09■□□□□ 0.17
FOXC2Q99958 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
FOXC2Q99958 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
FOXC2Q99958 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC16.09■□□□□ 0.17
FOXC2Q99958 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
FOXC2Q99958 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
FOXC2Q99958 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC16.09■□□□□ 0.17
FOXC2Q99958 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
FOXC2Q99958 AP002469.2-201ENST00000531724 424 ntBASIC16.09■□□□□ 0.17
FOXC2Q99958 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC16.09■□□□□ 0.17
FOXC2Q99958 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC16.09■□□□□ 0.17
FOXC2Q99958 SLC25A6P4-201ENST00000586535 553 ntBASIC16.09■□□□□ 0.17
FOXC2Q99958 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
FOXC2Q99958 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC16.09■□□□□ 0.17
FOXC2Q99958 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
FOXC2Q99958 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC16.09■□□□□ 0.17
FOXC2Q99958 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
FOXC2Q99958 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC16.09■□□□□ 0.17
FOXC2Q99958 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
FOXC2Q99958 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
FOXC2Q99958 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
FOXC2Q99958 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.17
FOXC2Q99958 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
FOXC2Q99958 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC16.08■□□□□ 0.17
FOXC2Q99958 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
FOXC2Q99958 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
FOXC2Q99958 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
FOXC2Q99958 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
FOXC2Q99958 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
FOXC2Q99958 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC16.08■□□□□ 0.17
FOXC2Q99958 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
FOXC2Q99958 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC16.08■□□□□ 0.16
FOXC2Q99958 BID-212ENST00000614949 1988 ntTSL 5 BASIC16.08■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms