Protein–RNA interactions for Protein: Q99624

SLC38A3, Sodium-coupled neutral amino acid transporter 3, humanhuman

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC38A3Q99624 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
SLC38A3Q99624 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SLC38A3Q99624 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SLC38A3Q99624 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC18.56■□□□□ 0.56
SLC38A3Q99624 GXYLT1P6-201ENST00000456472 1187 ntBASIC18.56■□□□□ 0.56
SLC38A3Q99624 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC18.56■□□□□ 0.56
SLC38A3Q99624 NT5C-211ENST00000582170 653 ntTSL 3 BASIC18.56■□□□□ 0.56
SLC38A3Q99624 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC18.56■□□□□ 0.56
SLC38A3Q99624 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC18.56■□□□□ 0.56
SLC38A3Q99624 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SLC38A3Q99624 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC18.56■□□□□ 0.56
SLC38A3Q99624 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC18.56■□□□□ 0.56
SLC38A3Q99624 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC18.56■□□□□ 0.56
SLC38A3Q99624 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
SLC38A3Q99624 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
SLC38A3Q99624 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SLC38A3Q99624 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC18.56■□□□□ 0.56
SLC38A3Q99624 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
SLC38A3Q99624 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
SLC38A3Q99624 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SLC38A3Q99624 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SLC38A3Q99624 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
SLC38A3Q99624 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
SLC38A3Q99624 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SLC38A3Q99624 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
SLC38A3Q99624 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SLC38A3Q99624 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC18.55■□□□□ 0.56
SLC38A3Q99624 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC18.55■□□□□ 0.56
SLC38A3Q99624 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SLC38A3Q99624 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SLC38A3Q99624 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
SLC38A3Q99624 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC18.55■□□□□ 0.56
SLC38A3Q99624 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC18.55■□□□□ 0.56
SLC38A3Q99624 AL512604.3-201ENST00000569583 964 ntBASIC18.55■□□□□ 0.56
SLC38A3Q99624 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
SLC38A3Q99624 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC18.55■□□□□ 0.56
SLC38A3Q99624 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC18.55■□□□□ 0.56
SLC38A3Q99624 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
SLC38A3Q99624 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
SLC38A3Q99624 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
SLC38A3Q99624 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SLC38A3Q99624 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC18.55■□□□□ 0.56
SLC38A3Q99624 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SLC38A3Q99624 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
SLC38A3Q99624 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC18.54■□□□□ 0.56
SLC38A3Q99624 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC18.54■□□□□ 0.56
SLC38A3Q99624 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SLC38A3Q99624 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
SLC38A3Q99624 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC18.54■□□□□ 0.56
SLC38A3Q99624 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
SLC38A3Q99624 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SLC38A3Q99624 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC18.54■□□□□ 0.56
SLC38A3Q99624 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SLC38A3Q99624 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
SLC38A3Q99624 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SLC38A3Q99624 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC18.54■□□□□ 0.56
SLC38A3Q99624 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
SLC38A3Q99624 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SLC38A3Q99624 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC18.54■□□□□ 0.56
SLC38A3Q99624 AK4P3-201ENST00000418260 669 ntBASIC18.54■□□□□ 0.56
SLC38A3Q99624 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC18.54■□□□□ 0.56
SLC38A3Q99624 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC18.54■□□□□ 0.56
SLC38A3Q99624 AC006011.2-201ENST00000621313 1158 ntBASIC18.54■□□□□ 0.56
SLC38A3Q99624 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SLC38A3Q99624 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SLC38A3Q99624 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SLC38A3Q99624 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
SLC38A3Q99624 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
SLC38A3Q99624 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
SLC38A3Q99624 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
SLC38A3Q99624 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
SLC38A3Q99624 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
SLC38A3Q99624 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SLC38A3Q99624 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
SLC38A3Q99624 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SLC38A3Q99624 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
SLC38A3Q99624 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC18.53■□□□□ 0.56
SLC38A3Q99624 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
SLC38A3Q99624 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC18.53■□□□□ 0.56
SLC38A3Q99624 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC18.53■□□□□ 0.56
SLC38A3Q99624 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
SLC38A3Q99624 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC18.53■□□□□ 0.56
SLC38A3Q99624 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
SLC38A3Q99624 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC18.53■□□□□ 0.56
SLC38A3Q99624 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
SLC38A3Q99624 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
SLC38A3Q99624 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SLC38A3Q99624 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
SLC38A3Q99624 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC18.52■□□□□ 0.56
SLC38A3Q99624 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SLC38A3Q99624 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
SLC38A3Q99624 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
SLC38A3Q99624 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC18.52■□□□□ 0.56
SLC38A3Q99624 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SLC38A3Q99624 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SLC38A3Q99624 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
SLC38A3Q99624 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
SLC38A3Q99624 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
SLC38A3Q99624 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
SLC38A3Q99624 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms