Protein–RNA interactions for Protein: Q99466

NOTCH4, Neurogenic locus notch homolog protein 4, humanhuman

Predictions only

Length 2,003 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH4Q99466 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
NOTCH4Q99466 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
NOTCH4Q99466 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC19.76■□□□□ 0.75
NOTCH4Q99466 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
NOTCH4Q99466 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC19.76■□□□□ 0.75
NOTCH4Q99466 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
NOTCH4Q99466 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
NOTCH4Q99466 HLA-F-220ENST00000434407 884 ntBASIC19.76■□□□□ 0.75
NOTCH4Q99466 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC19.76■□□□□ 0.75
NOTCH4Q99466 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
NOTCH4Q99466 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC19.76■□□□□ 0.75
NOTCH4Q99466 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC19.76■□□□□ 0.75
NOTCH4Q99466 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC19.76■□□□□ 0.75
NOTCH4Q99466 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
NOTCH4Q99466 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
NOTCH4Q99466 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC19.76■□□□□ 0.75
NOTCH4Q99466 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
NOTCH4Q99466 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
NOTCH4Q99466 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC19.76■□□□□ 0.75
NOTCH4Q99466 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC19.76■□□□□ 0.75
NOTCH4Q99466 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC19.76■□□□□ 0.75
NOTCH4Q99466 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
NOTCH4Q99466 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC19.76■□□□□ 0.75
NOTCH4Q99466 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
NOTCH4Q99466 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
NOTCH4Q99466 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
NOTCH4Q99466 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
NOTCH4Q99466 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC19.75■□□□□ 0.75
NOTCH4Q99466 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
NOTCH4Q99466 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC19.75■□□□□ 0.75
NOTCH4Q99466 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
NOTCH4Q99466 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
NOTCH4Q99466 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
NOTCH4Q99466 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC19.75■□□□□ 0.75
NOTCH4Q99466 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
NOTCH4Q99466 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
NOTCH4Q99466 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC19.75■□□□□ 0.75
NOTCH4Q99466 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
NOTCH4Q99466 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC19.75■□□□□ 0.75
NOTCH4Q99466 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
NOTCH4Q99466 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC19.75■□□□□ 0.75
NOTCH4Q99466 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC19.75■□□□□ 0.75
NOTCH4Q99466 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC19.75■□□□□ 0.75
NOTCH4Q99466 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
NOTCH4Q99466 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
NOTCH4Q99466 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC19.74■□□□□ 0.75
NOTCH4Q99466 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
NOTCH4Q99466 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
NOTCH4Q99466 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC19.74■□□□□ 0.75
NOTCH4Q99466 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
NOTCH4Q99466 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
NOTCH4Q99466 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC19.74■□□□□ 0.75
NOTCH4Q99466 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
NOTCH4Q99466 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
NOTCH4Q99466 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
NOTCH4Q99466 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC19.74■□□□□ 0.75
NOTCH4Q99466 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC19.74■□□□□ 0.75
NOTCH4Q99466 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
NOTCH4Q99466 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
NOTCH4Q99466 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
NOTCH4Q99466 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
NOTCH4Q99466 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
NOTCH4Q99466 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
NOTCH4Q99466 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
NOTCH4Q99466 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC19.73■□□□□ 0.75
NOTCH4Q99466 BCL10-202ENST00000620248 774 ntTSL 5 BASIC19.73■□□□□ 0.75
NOTCH4Q99466 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
NOTCH4Q99466 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
NOTCH4Q99466 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
NOTCH4Q99466 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC19.73■□□□□ 0.75
NOTCH4Q99466 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
NOTCH4Q99466 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
NOTCH4Q99466 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC19.73■□□□□ 0.75
NOTCH4Q99466 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
NOTCH4Q99466 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC19.73■□□□□ 0.75
NOTCH4Q99466 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
NOTCH4Q99466 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
NOTCH4Q99466 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
NOTCH4Q99466 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC19.73■□□□□ 0.75
NOTCH4Q99466 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
NOTCH4Q99466 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
NOTCH4Q99466 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC19.73■□□□□ 0.75
NOTCH4Q99466 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC19.73■□□□□ 0.75
NOTCH4Q99466 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC19.73■□□□□ 0.75
NOTCH4Q99466 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
NOTCH4Q99466 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
NOTCH4Q99466 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
NOTCH4Q99466 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
NOTCH4Q99466 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC19.72■□□□□ 0.75
NOTCH4Q99466 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC19.72■□□□□ 0.75
NOTCH4Q99466 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
NOTCH4Q99466 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
NOTCH4Q99466 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC19.72■□□□□ 0.75
NOTCH4Q99466 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC19.72■□□□□ 0.75
NOTCH4Q99466 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
NOTCH4Q99466 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC19.72■□□□□ 0.75
NOTCH4Q99466 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
NOTCH4Q99466 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC19.72■□□□□ 0.75
NOTCH4Q99466 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
NOTCH4Q99466 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 52.6 ms