Protein–RNA interactions for Protein: Q96PU9

ODF3, Outer dense fiber protein 3, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ODF3Q96PU9 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC14.15□□□□□ -0.14
ODF3Q96PU9 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
ODF3Q96PU9 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC14.15□□□□□ -0.14
ODF3Q96PU9 AC083906.6-201ENST00000641366 219 ntBASIC14.15□□□□□ -0.14
ODF3Q96PU9 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
ODF3Q96PU9 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC14.15□□□□□ -0.14
ODF3Q96PU9 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
ODF3Q96PU9 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
ODF3Q96PU9 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
ODF3Q96PU9 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
ODF3Q96PU9 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
ODF3Q96PU9 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
ODF3Q96PU9 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
ODF3Q96PU9 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
ODF3Q96PU9 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
ODF3Q96PU9 AL049812.1-201ENST00000432563 2267 ntBASIC14.15□□□□□ -0.14
ODF3Q96PU9 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC14.15□□□□□ -0.15
ODF3Q96PU9 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
ODF3Q96PU9 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
ODF3Q96PU9 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
ODF3Q96PU9 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
ODF3Q96PU9 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
ODF3Q96PU9 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
ODF3Q96PU9 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
ODF3Q96PU9 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
ODF3Q96PU9 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC14.14□□□□□ -0.15
ODF3Q96PU9 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
ODF3Q96PU9 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
ODF3Q96PU9 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC14.14□□□□□ -0.15
ODF3Q96PU9 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
ODF3Q96PU9 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC14.14□□□□□ -0.15
ODF3Q96PU9 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
ODF3Q96PU9 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
ODF3Q96PU9 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
ODF3Q96PU9 APTR-205ENST00000447009 902 ntTSL 2 BASIC14.14□□□□□ -0.15
ODF3Q96PU9 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC14.14□□□□□ -0.15
ODF3Q96PU9 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC14.14□□□□□ -0.15
ODF3Q96PU9 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC14.14□□□□□ -0.15
ODF3Q96PU9 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
ODF3Q96PU9 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
ODF3Q96PU9 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
ODF3Q96PU9 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
ODF3Q96PU9 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC14.14□□□□□ -0.15
ODF3Q96PU9 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
ODF3Q96PU9 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
ODF3Q96PU9 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
ODF3Q96PU9 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC14.14□□□□□ -0.15
ODF3Q96PU9 AL031598.1-201ENST00000561511 1773 ntBASIC14.14□□□□□ -0.15
ODF3Q96PU9 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
ODF3Q96PU9 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
ODF3Q96PU9 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
ODF3Q96PU9 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
ODF3Q96PU9 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
ODF3Q96PU9 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
ODF3Q96PU9 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
ODF3Q96PU9 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC14.13□□□□□ -0.15
ODF3Q96PU9 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
ODF3Q96PU9 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC14.13□□□□□ -0.15
ODF3Q96PU9 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
ODF3Q96PU9 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
ODF3Q96PU9 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC14.13□□□□□ -0.15
ODF3Q96PU9 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC14.13□□□□□ -0.15
ODF3Q96PU9 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
ODF3Q96PU9 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
ODF3Q96PU9 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC14.13□□□□□ -0.15
ODF3Q96PU9 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
ODF3Q96PU9 ID1-201ENST00000376105 1233 ntBASIC14.13□□□□□ -0.15
ODF3Q96PU9 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC14.13□□□□□ -0.15
ODF3Q96PU9 KRT16P5-201ENST00000455284 522 ntBASIC14.13□□□□□ -0.15
ODF3Q96PU9 RNA5SP413-201ENST00000516373 109 ntBASIC14.13□□□□□ -0.15
ODF3Q96PU9 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC14.13□□□□□ -0.15
ODF3Q96PU9 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
ODF3Q96PU9 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC14.13□□□□□ -0.15
ODF3Q96PU9 EMC9-206ENST00000560403 872 ntTSL 2 BASIC14.13□□□□□ -0.15
ODF3Q96PU9 KLF13-207ENST00000560473 489 ntTSL 3 BASIC14.13□□□□□ -0.15
ODF3Q96PU9 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC14.13□□□□□ -0.15
ODF3Q96PU9 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC14.13□□□□□ -0.15
ODF3Q96PU9 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
ODF3Q96PU9 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC14.13□□□□□ -0.15
ODF3Q96PU9 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
ODF3Q96PU9 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC14.13□□□□□ -0.15
ODF3Q96PU9 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
ODF3Q96PU9 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC14.13□□□□□ -0.15
ODF3Q96PU9 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
ODF3Q96PU9 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
ODF3Q96PU9 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC14.13□□□□□ -0.15
ODF3Q96PU9 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
ODF3Q96PU9 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
ODF3Q96PU9 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC14.13□□□□□ -0.15
ODF3Q96PU9 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
ODF3Q96PU9 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
ODF3Q96PU9 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
ODF3Q96PU9 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
ODF3Q96PU9 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
ODF3Q96PU9 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
ODF3Q96PU9 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC14.12□□□□□ -0.15
ODF3Q96PU9 GAS2L1P1-201ENST00000420145 1480 ntBASIC14.12□□□□□ -0.15
ODF3Q96PU9 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
ODF3Q96PU9 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
ODF3Q96PU9 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC14.12□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms