Protein–RNA interactions for Protein: Q96PT4

DUX3, Putative double homeobox protein 3, humanhuman

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUX3Q96PT4 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
DUX3Q96PT4 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
DUX3Q96PT4 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
DUX3Q96PT4 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC14.9□□□□□ -0.02
DUX3Q96PT4 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
DUX3Q96PT4 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC14.9□□□□□ -0.02
DUX3Q96PT4 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
DUX3Q96PT4 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC14.9□□□□□ -0.02
DUX3Q96PT4 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC14.9□□□□□ -0.02
DUX3Q96PT4 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC14.9□□□□□ -0.02
DUX3Q96PT4 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC14.9□□□□□ -0.02
DUX3Q96PT4 CYGB-204ENST00000589342 815 ntTSL 3 BASIC14.9□□□□□ -0.02
DUX3Q96PT4 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
DUX3Q96PT4 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC14.9□□□□□ -0.02
DUX3Q96PT4 AC130371.2-201ENST00000619443 611 ntBASIC14.9□□□□□ -0.02
DUX3Q96PT4 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC14.9□□□□□ -0.02
DUX3Q96PT4 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
DUX3Q96PT4 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
DUX3Q96PT4 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
DUX3Q96PT4 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
DUX3Q96PT4 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
DUX3Q96PT4 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC14.9□□□□□ -0.02
DUX3Q96PT4 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
DUX3Q96PT4 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
DUX3Q96PT4 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
DUX3Q96PT4 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
DUX3Q96PT4 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
DUX3Q96PT4 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
DUX3Q96PT4 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
DUX3Q96PT4 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
DUX3Q96PT4 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC14.89□□□□□ -0.03
DUX3Q96PT4 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
DUX3Q96PT4 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
DUX3Q96PT4 INGX-201ENST00000359239 846 ntBASIC14.89□□□□□ -0.03
DUX3Q96PT4 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC14.89□□□□□ -0.03
DUX3Q96PT4 CRAT-202ENST00000393384 973 ntTSL 2 BASIC14.89□□□□□ -0.03
DUX3Q96PT4 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
DUX3Q96PT4 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC14.89□□□□□ -0.03
DUX3Q96PT4 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC14.89□□□□□ -0.03
DUX3Q96PT4 FAM207BP-201ENST00000447172 505 ntBASIC14.89□□□□□ -0.03
DUX3Q96PT4 ECEL1P2-202ENST00000465689 757 ntBASIC14.89□□□□□ -0.03
DUX3Q96PT4 AC091390.4-202ENST00000476426 537 ntBASIC14.89□□□□□ -0.03
DUX3Q96PT4 Z85996.1-201ENST00000494644 937 ntBASIC14.89□□□□□ -0.03
DUX3Q96PT4 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
DUX3Q96PT4 TK2-213ENST00000563369 882 ntTSL 5 BASIC14.89□□□□□ -0.03
DUX3Q96PT4 AL160286.2-201ENST00000567150 934 ntBASIC14.89□□□□□ -0.03
DUX3Q96PT4 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
DUX3Q96PT4 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
DUX3Q96PT4 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC14.89□□□□□ -0.03
DUX3Q96PT4 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC14.89□□□□□ -0.03
DUX3Q96PT4 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
DUX3Q96PT4 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
DUX3Q96PT4 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC14.89□□□□□ -0.03
DUX3Q96PT4 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
DUX3Q96PT4 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC14.89□□□□□ -0.03
DUX3Q96PT4 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
DUX3Q96PT4 KRT18P22-201ENST00000402024 1347 ntBASIC14.89□□□□□ -0.03
DUX3Q96PT4 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
DUX3Q96PT4 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC14.89□□□□□ -0.03
DUX3Q96PT4 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC14.89□□□□□ -0.03
DUX3Q96PT4 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC14.89□□□□□ -0.03
DUX3Q96PT4 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC14.88□□□□□ -0.03
DUX3Q96PT4 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC14.88□□□□□ -0.03
DUX3Q96PT4 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC14.88□□□□□ -0.03
DUX3Q96PT4 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC14.88□□□□□ -0.03
DUX3Q96PT4 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
DUX3Q96PT4 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC14.88□□□□□ -0.03
DUX3Q96PT4 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
DUX3Q96PT4 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
DUX3Q96PT4 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
DUX3Q96PT4 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
DUX3Q96PT4 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC14.88□□□□□ -0.03
DUX3Q96PT4 PTPA-216ENST00000432651 857 ntTSL 2 BASIC14.88□□□□□ -0.03
DUX3Q96PT4 MFAP1P1-201ENST00000442257 1255 ntBASIC14.88□□□□□ -0.03
DUX3Q96PT4 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC14.88□□□□□ -0.03
DUX3Q96PT4 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC14.88□□□□□ -0.03
DUX3Q96PT4 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
DUX3Q96PT4 C2orf69P3-201ENST00000565542 1120 ntBASIC14.88□□□□□ -0.03
DUX3Q96PT4 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC14.88□□□□□ -0.03
DUX3Q96PT4 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
DUX3Q96PT4 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC14.88□□□□□ -0.03
DUX3Q96PT4 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
DUX3Q96PT4 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
DUX3Q96PT4 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
DUX3Q96PT4 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC14.88□□□□□ -0.03
DUX3Q96PT4 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
DUX3Q96PT4 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
DUX3Q96PT4 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC14.88□□□□□ -0.03
DUX3Q96PT4 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC14.88□□□□□ -0.03
DUX3Q96PT4 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
DUX3Q96PT4 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
DUX3Q96PT4 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
DUX3Q96PT4 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
DUX3Q96PT4 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
DUX3Q96PT4 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC14.87□□□□□ -0.03
DUX3Q96PT4 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC14.87□□□□□ -0.03
DUX3Q96PT4 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
DUX3Q96PT4 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
DUX3Q96PT4 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC14.87□□□□□ -0.03
DUX3Q96PT4 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC14.87□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms