Protein–RNA interactions for Protein: Q96FL8

SLC47A1, Multidrug and toxin extrusion protein 1, humanhuman

Predictions only

Length 570 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC47A1Q96FL8 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SLC47A1Q96FL8 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
SLC47A1Q96FL8 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC18.06■□□□□ 0.48
SLC47A1Q96FL8 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SLC47A1Q96FL8 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
SLC47A1Q96FL8 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC18.06■□□□□ 0.48
SLC47A1Q96FL8 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SLC47A1Q96FL8 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
SLC47A1Q96FL8 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SLC47A1Q96FL8 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SLC47A1Q96FL8 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
SLC47A1Q96FL8 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
SLC47A1Q96FL8 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
SLC47A1Q96FL8 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC18.06■□□□□ 0.48
SLC47A1Q96FL8 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
SLC47A1Q96FL8 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
SLC47A1Q96FL8 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SLC47A1Q96FL8 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC18.06■□□□□ 0.48
SLC47A1Q96FL8 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SLC47A1Q96FL8 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SLC47A1Q96FL8 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SLC47A1Q96FL8 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
SLC47A1Q96FL8 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SLC47A1Q96FL8 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC18.05■□□□□ 0.48
SLC47A1Q96FL8 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SLC47A1Q96FL8 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SLC47A1Q96FL8 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
SLC47A1Q96FL8 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC18.05■□□□□ 0.48
SLC47A1Q96FL8 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SLC47A1Q96FL8 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SLC47A1Q96FL8 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SLC47A1Q96FL8 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SLC47A1Q96FL8 SERP1-205ENST00000487153 657 ntTSL 4 BASIC18.05■□□□□ 0.48
SLC47A1Q96FL8 AC083906.2-201ENST00000511578 360 ntBASIC18.05■□□□□ 0.48
SLC47A1Q96FL8 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC18.05■□□□□ 0.48
SLC47A1Q96FL8 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC18.05■□□□□ 0.48
SLC47A1Q96FL8 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC18.05■□□□□ 0.48
SLC47A1Q96FL8 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SLC47A1Q96FL8 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
SLC47A1Q96FL8 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SLC47A1Q96FL8 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC18.05■□□□□ 0.48
SLC47A1Q96FL8 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SLC47A1Q96FL8 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
SLC47A1Q96FL8 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SLC47A1Q96FL8 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC18.05■□□□□ 0.48
SLC47A1Q96FL8 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC18.05■□□□□ 0.48
SLC47A1Q96FL8 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SLC47A1Q96FL8 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC18.05■□□□□ 0.48
SLC47A1Q96FL8 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
SLC47A1Q96FL8 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SLC47A1Q96FL8 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
SLC47A1Q96FL8 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SLC47A1Q96FL8 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
SLC47A1Q96FL8 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
SLC47A1Q96FL8 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC18.04■□□□□ 0.48
SLC47A1Q96FL8 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC18.04■□□□□ 0.48
SLC47A1Q96FL8 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC18.04■□□□□ 0.48
SLC47A1Q96FL8 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC18.04■□□□□ 0.48
SLC47A1Q96FL8 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC18.04■□□□□ 0.48
SLC47A1Q96FL8 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
SLC47A1Q96FL8 MOK-233ENST00000524214 1539 ntTSL 2 BASIC18.04■□□□□ 0.48
SLC47A1Q96FL8 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
SLC47A1Q96FL8 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SLC47A1Q96FL8 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC18.04■□□□□ 0.48
SLC47A1Q96FL8 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC18.04■□□□□ 0.48
SLC47A1Q96FL8 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC18.04■□□□□ 0.48
SLC47A1Q96FL8 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC18.04■□□□□ 0.48
SLC47A1Q96FL8 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC18.04■□□□□ 0.48
SLC47A1Q96FL8 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC18.04■□□□□ 0.48
SLC47A1Q96FL8 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC18.04■□□□□ 0.48
SLC47A1Q96FL8 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SLC47A1Q96FL8 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SLC47A1Q96FL8 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
SLC47A1Q96FL8 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
SLC47A1Q96FL8 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC18.04■□□□□ 0.48
SLC47A1Q96FL8 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SLC47A1Q96FL8 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC18.03■□□□□ 0.48
SLC47A1Q96FL8 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
SLC47A1Q96FL8 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
SLC47A1Q96FL8 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SLC47A1Q96FL8 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
SLC47A1Q96FL8 IRX1P1-201ENST00000438849 1838 ntBASIC18.03■□□□□ 0.48
SLC47A1Q96FL8 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
SLC47A1Q96FL8 AL512353.2-201ENST00000448759 1962 ntBASIC18.03■□□□□ 0.48
SLC47A1Q96FL8 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SLC47A1Q96FL8 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
SLC47A1Q96FL8 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
SLC47A1Q96FL8 CALM3-202ENST00000391918 702 ntTSL 2 BASIC18.03■□□□□ 0.48
SLC47A1Q96FL8 MIPEPP3-201ENST00000412105 444 ntBASIC18.03■□□□□ 0.48
SLC47A1Q96FL8 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC18.03■□□□□ 0.48
SLC47A1Q96FL8 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC18.03■□□□□ 0.48
SLC47A1Q96FL8 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC18.03■□□□□ 0.48
SLC47A1Q96FL8 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC18.03■□□□□ 0.48
SLC47A1Q96FL8 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC18.03■□□□□ 0.48
SLC47A1Q96FL8 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC18.03■□□□□ 0.48
SLC47A1Q96FL8 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC18.03■□□□□ 0.48
SLC47A1Q96FL8 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
SLC47A1Q96FL8 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC18.03■□□□□ 0.48
SLC47A1Q96FL8 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
SLC47A1Q96FL8 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms