Protein–RNA interactions for Protein: Q96F44

TRIM11, E3 ubiquitin-protein ligase TRIM11, humanhuman

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11Q96F44 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC20.25■□□□□ 0.83
TRIM11Q96F44 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TRIM11Q96F44 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
TRIM11Q96F44 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
TRIM11Q96F44 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
TRIM11Q96F44 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
TRIM11Q96F44 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
TRIM11Q96F44 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
TRIM11Q96F44 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TRIM11Q96F44 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC20.25■□□□□ 0.83
TRIM11Q96F44 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
TRIM11Q96F44 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
TRIM11Q96F44 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
TRIM11Q96F44 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TRIM11Q96F44 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
TRIM11Q96F44 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
TRIM11Q96F44 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC20.24■□□□□ 0.83
TRIM11Q96F44 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TRIM11Q96F44 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
TRIM11Q96F44 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
TRIM11Q96F44 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC20.24■□□□□ 0.83
TRIM11Q96F44 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC20.24■□□□□ 0.83
TRIM11Q96F44 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC20.24■□□□□ 0.83
TRIM11Q96F44 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TRIM11Q96F44 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TRIM11Q96F44 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TRIM11Q96F44 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC20.24■□□□□ 0.83
TRIM11Q96F44 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
TRIM11Q96F44 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
TRIM11Q96F44 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC20.24■□□□□ 0.83
TRIM11Q96F44 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC20.24■□□□□ 0.83
TRIM11Q96F44 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC20.24■□□□□ 0.83
TRIM11Q96F44 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC20.24■□□□□ 0.83
TRIM11Q96F44 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
TRIM11Q96F44 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC20.24■□□□□ 0.83
TRIM11Q96F44 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC20.24■□□□□ 0.83
TRIM11Q96F44 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
TRIM11Q96F44 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TRIM11Q96F44 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TRIM11Q96F44 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TRIM11Q96F44 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC20.24■□□□□ 0.83
TRIM11Q96F44 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC20.23■□□□□ 0.83
TRIM11Q96F44 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC20.23■□□□□ 0.83
TRIM11Q96F44 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
TRIM11Q96F44 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC20.23■□□□□ 0.83
TRIM11Q96F44 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TRIM11Q96F44 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC20.23■□□□□ 0.83
TRIM11Q96F44 AC133681.1-201ENST00000465482 601 ntBASIC20.23■□□□□ 0.83
TRIM11Q96F44 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC20.23■□□□□ 0.83
TRIM11Q96F44 LY6E-205ENST00000519611 635 ntTSL 3 BASIC20.23■□□□□ 0.83
TRIM11Q96F44 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC20.23■□□□□ 0.83
TRIM11Q96F44 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC20.23■□□□□ 0.83
TRIM11Q96F44 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC20.23■□□□□ 0.83
TRIM11Q96F44 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC20.23■□□□□ 0.83
TRIM11Q96F44 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC20.23■□□□□ 0.83
TRIM11Q96F44 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TRIM11Q96F44 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
TRIM11Q96F44 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC20.23■□□□□ 0.83
TRIM11Q96F44 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC20.23■□□□□ 0.83
TRIM11Q96F44 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TRIM11Q96F44 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
TRIM11Q96F44 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC20.23■□□□□ 0.83
TRIM11Q96F44 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TRIM11Q96F44 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
TRIM11Q96F44 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
TRIM11Q96F44 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC20.22■□□□□ 0.83
TRIM11Q96F44 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC20.22■□□□□ 0.83
TRIM11Q96F44 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
TRIM11Q96F44 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
TRIM11Q96F44 AC093525.10-201ENST00000625130 1569 ntBASIC20.22■□□□□ 0.83
TRIM11Q96F44 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC20.22■□□□□ 0.83
TRIM11Q96F44 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
TRIM11Q96F44 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
TRIM11Q96F44 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
TRIM11Q96F44 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
TRIM11Q96F44 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
TRIM11Q96F44 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC20.22■□□□□ 0.83
TRIM11Q96F44 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
TRIM11Q96F44 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC20.22■□□□□ 0.83
TRIM11Q96F44 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC20.22■□□□□ 0.83
TRIM11Q96F44 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC20.22■□□□□ 0.83
TRIM11Q96F44 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
TRIM11Q96F44 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
TRIM11Q96F44 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
TRIM11Q96F44 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
TRIM11Q96F44 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC20.22■□□□□ 0.83
TRIM11Q96F44 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC20.22■□□□□ 0.83
TRIM11Q96F44 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
TRIM11Q96F44 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
TRIM11Q96F44 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
TRIM11Q96F44 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
TRIM11Q96F44 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC20.22■□□□□ 0.83
TRIM11Q96F44 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC20.22■□□□□ 0.83
TRIM11Q96F44 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
TRIM11Q96F44 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
TRIM11Q96F44 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
TRIM11Q96F44 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC20.22■□□□□ 0.83
TRIM11Q96F44 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
TRIM11Q96F44 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
TRIM11Q96F44 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms