Protein–RNA interactions for Protein: Q96B33

CLDN23, Claudin-23, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN23Q96B33 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CLDN23Q96B33 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC19.15■□□□□ 0.66
CLDN23Q96B33 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC19.15■□□□□ 0.66
CLDN23Q96B33 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
CLDN23Q96B33 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CLDN23Q96B33 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
CLDN23Q96B33 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC19.15■□□□□ 0.66
CLDN23Q96B33 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC19.15■□□□□ 0.66
CLDN23Q96B33 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
CLDN23Q96B33 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CLDN23Q96B33 AC036111.1-201ENST00000533973 1582 ntBASIC19.15■□□□□ 0.66
CLDN23Q96B33 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CLDN23Q96B33 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.66
CLDN23Q96B33 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.66
CLDN23Q96B33 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.66
CLDN23Q96B33 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC19.14■□□□□ 0.65
CLDN23Q96B33 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC19.14■□□□□ 0.65
CLDN23Q96B33 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CLDN23Q96B33 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC19.14■□□□□ 0.65
CLDN23Q96B33 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC19.14■□□□□ 0.65
CLDN23Q96B33 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CLDN23Q96B33 AP000867.3-201ENST00000524675 377 ntBASIC19.14■□□□□ 0.65
CLDN23Q96B33 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC19.14■□□□□ 0.65
CLDN23Q96B33 SLC25A6P4-201ENST00000586535 553 ntBASIC19.14■□□□□ 0.65
CLDN23Q96B33 AL136038.4-201ENST00000603606 1261 ntBASIC19.14■□□□□ 0.65
CLDN23Q96B33 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CLDN23Q96B33 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CLDN23Q96B33 AL391807.1-203ENST00000604392 2365 ntBASIC19.14■□□□□ 0.65
CLDN23Q96B33 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC19.14■□□□□ 0.65
CLDN23Q96B33 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CLDN23Q96B33 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CLDN23Q96B33 AC104417.2-201ENST00000562989 1793 ntBASIC19.14■□□□□ 0.65
CLDN23Q96B33 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
CLDN23Q96B33 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CLDN23Q96B33 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CLDN23Q96B33 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
CLDN23Q96B33 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC19.13■□□□□ 0.65
CLDN23Q96B33 AP000593.1-201ENST00000393668 712 ntBASIC19.13■□□□□ 0.65
CLDN23Q96B33 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
CLDN23Q96B33 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
CLDN23Q96B33 LINC00265-3P-201ENST00000447588 903 ntBASIC19.13■□□□□ 0.65
CLDN23Q96B33 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
CLDN23Q96B33 AP002469.2-201ENST00000531724 424 ntBASIC19.13■□□□□ 0.65
CLDN23Q96B33 AL662844.1-201ENST00000546340 181 ntBASIC19.13■□□□□ 0.65
CLDN23Q96B33 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC19.13■□□□□ 0.65
CLDN23Q96B33 MIR3180-5-201ENST00000583743 153 ntBASIC19.13■□□□□ 0.65
CLDN23Q96B33 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
CLDN23Q96B33 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC19.13■□□□□ 0.65
CLDN23Q96B33 AL157888.1-201ENST00000631930 593 ntBASIC19.13■□□□□ 0.65
CLDN23Q96B33 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC19.13■□□□□ 0.65
CLDN23Q96B33 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
CLDN23Q96B33 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CLDN23Q96B33 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
CLDN23Q96B33 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC19.13■□□□□ 0.65
CLDN23Q96B33 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CLDN23Q96B33 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
CLDN23Q96B33 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
CLDN23Q96B33 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC19.12■□□□□ 0.65
CLDN23Q96B33 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CLDN23Q96B33 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CLDN23Q96B33 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
CLDN23Q96B33 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CLDN23Q96B33 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC19.12■□□□□ 0.65
CLDN23Q96B33 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC19.12■□□□□ 0.65
CLDN23Q96B33 FOSL1P1-201ENST00000511041 816 ntBASIC19.12■□□□□ 0.65
CLDN23Q96B33 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC19.12■□□□□ 0.65
CLDN23Q96B33 MIR3917-201ENST00000580971 93 ntBASIC19.12■□□□□ 0.65
CLDN23Q96B33 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC19.12■□□□□ 0.65
CLDN23Q96B33 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC19.12■□□□□ 0.65
CLDN23Q96B33 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
CLDN23Q96B33 AC026310.3-201ENST00000625186 2373 ntBASIC19.12■□□□□ 0.65
CLDN23Q96B33 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CLDN23Q96B33 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
CLDN23Q96B33 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC19.12■□□□□ 0.65
CLDN23Q96B33 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC19.12■□□□□ 0.65
CLDN23Q96B33 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
CLDN23Q96B33 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CLDN23Q96B33 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CLDN23Q96B33 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CLDN23Q96B33 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC19.11■□□□□ 0.65
CLDN23Q96B33 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
CLDN23Q96B33 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CLDN23Q96B33 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
CLDN23Q96B33 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC19.11■□□□□ 0.65
CLDN23Q96B33 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CLDN23Q96B33 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CLDN23Q96B33 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CLDN23Q96B33 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
CLDN23Q96B33 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
CLDN23Q96B33 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CLDN23Q96B33 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC19.11■□□□□ 0.65
CLDN23Q96B33 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
CLDN23Q96B33 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC19.11■□□□□ 0.65
CLDN23Q96B33 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
CLDN23Q96B33 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC19.11■□□□□ 0.65
CLDN23Q96B33 BMF-207ENST00000559701 630 ntTSL 3 BASIC19.11■□□□□ 0.65
CLDN23Q96B33 RNF126P1-202ENST00000569893 925 ntBASIC19.11■□□□□ 0.65
CLDN23Q96B33 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC19.11■□□□□ 0.65
CLDN23Q96B33 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
CLDN23Q96B33 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC19.11■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms