Protein–RNA interactions for Protein: Q92738

USP6NL, USP6 N-terminal-like protein, humanhuman

Predictions only

Length 828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NLQ92738 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
USP6NLQ92738 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC21.69■■□□□ 1.06
USP6NLQ92738 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC21.69■■□□□ 1.06
USP6NLQ92738 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
USP6NLQ92738 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC21.69■■□□□ 1.06
USP6NLQ92738 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
USP6NLQ92738 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC21.69■■□□□ 1.06
USP6NLQ92738 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
USP6NLQ92738 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
USP6NLQ92738 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
USP6NLQ92738 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
USP6NLQ92738 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
USP6NLQ92738 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC21.68■■□□□ 1.06
USP6NLQ92738 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC21.68■■□□□ 1.06
USP6NLQ92738 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
USP6NLQ92738 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC21.68■■□□□ 1.06
USP6NLQ92738 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC21.68■■□□□ 1.06
USP6NLQ92738 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
USP6NLQ92738 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC21.68■■□□□ 1.06
USP6NLQ92738 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC21.68■■□□□ 1.06
USP6NLQ92738 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC21.68■■□□□ 1.06
USP6NLQ92738 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
USP6NLQ92738 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
USP6NLQ92738 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
USP6NLQ92738 DET1-207ENST00000564406 2315 ntTSL 2 BASIC21.68■■□□□ 1.06
USP6NLQ92738 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
USP6NLQ92738 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
USP6NLQ92738 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
USP6NLQ92738 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
USP6NLQ92738 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC21.67■■□□□ 1.06
USP6NLQ92738 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
USP6NLQ92738 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
USP6NLQ92738 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC21.67■■□□□ 1.06
USP6NLQ92738 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
USP6NLQ92738 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
USP6NLQ92738 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
USP6NLQ92738 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC21.67■■□□□ 1.06
USP6NLQ92738 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC21.67■■□□□ 1.06
USP6NLQ92738 AP002383.4-201ENST00000442518 975 ntBASIC21.67■■□□□ 1.06
USP6NLQ92738 TSSC2-201ENST00000450217 709 ntBASIC21.67■■□□□ 1.06
USP6NLQ92738 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC21.67■■□□□ 1.06
USP6NLQ92738 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC21.67■■□□□ 1.06
USP6NLQ92738 AC011498.5-201ENST00000592027 486 ntBASIC21.67■■□□□ 1.06
USP6NLQ92738 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
USP6NLQ92738 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC21.67■■□□□ 1.06
USP6NLQ92738 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC21.67■■□□□ 1.06
USP6NLQ92738 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
USP6NLQ92738 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
USP6NLQ92738 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
USP6NLQ92738 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
USP6NLQ92738 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC21.66■■□□□ 1.06
USP6NLQ92738 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC21.66■■□□□ 1.06
USP6NLQ92738 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
USP6NLQ92738 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
USP6NLQ92738 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC21.66■■□□□ 1.06
USP6NLQ92738 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC21.66■■□□□ 1.06
USP6NLQ92738 UNC93B7-201ENST00000509439 705 ntBASIC21.66■■□□□ 1.06
USP6NLQ92738 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC21.66■■□□□ 1.06
USP6NLQ92738 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC21.66■■□□□ 1.06
USP6NLQ92738 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
USP6NLQ92738 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
USP6NLQ92738 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
USP6NLQ92738 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
USP6NLQ92738 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC21.66■■□□□ 1.06
USP6NLQ92738 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
USP6NLQ92738 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC21.66■■□□□ 1.06
USP6NLQ92738 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC21.66■■□□□ 1.06
USP6NLQ92738 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
USP6NLQ92738 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC21.65■■□□□ 1.06
USP6NLQ92738 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
USP6NLQ92738 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
USP6NLQ92738 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
USP6NLQ92738 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
USP6NLQ92738 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
USP6NLQ92738 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
USP6NLQ92738 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
USP6NLQ92738 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
USP6NLQ92738 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC21.65■■□□□ 1.06
USP6NLQ92738 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC21.65■■□□□ 1.06
USP6NLQ92738 AC034232.1-201ENST00000506026 1064 ntBASIC21.65■■□□□ 1.06
USP6NLQ92738 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC21.65■■□□□ 1.06
USP6NLQ92738 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC21.65■■□□□ 1.06
USP6NLQ92738 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
USP6NLQ92738 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC21.65■■□□□ 1.06
USP6NLQ92738 PRELID1P1-202ENST00000567272 903 ntBASIC21.65■■□□□ 1.06
USP6NLQ92738 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC21.65■■□□□ 1.06
USP6NLQ92738 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
USP6NLQ92738 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
USP6NLQ92738 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC21.65■■□□□ 1.06
USP6NLQ92738 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
USP6NLQ92738 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
USP6NLQ92738 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
USP6NLQ92738 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
USP6NLQ92738 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
USP6NLQ92738 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC21.64■■□□□ 1.06
USP6NLQ92738 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
USP6NLQ92738 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.06
USP6NLQ92738 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
USP6NLQ92738 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC21.64■■□□□ 1.06
USP6NLQ92738 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 45.5 ms