Protein–RNA interactions for Protein: Q92616

GCN1, eIF-2-alpha kinase activator GCN1, humanhuman

Known RBP Predictions only

Length 2,671 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1Q92616 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC16.79■□□□□ 0.28
GCN1Q92616 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC16.79■□□□□ 0.28
GCN1Q92616 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
GCN1Q92616 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
GCN1Q92616 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC16.79■□□□□ 0.28
GCN1Q92616 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
GCN1Q92616 RNA5SP416-201ENST00000516838 111 ntBASIC16.79■□□□□ 0.28
GCN1Q92616 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC16.79■□□□□ 0.28
GCN1Q92616 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC16.79■□□□□ 0.28
GCN1Q92616 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
GCN1Q92616 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
GCN1Q92616 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC16.79■□□□□ 0.28
GCN1Q92616 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC16.79■□□□□ 0.28
GCN1Q92616 BAD-202ENST00000394531 631 ntTSL 3 BASIC16.79■□□□□ 0.28
GCN1Q92616 AC007967.2-201ENST00000432613 625 ntBASIC16.79■□□□□ 0.28
GCN1Q92616 ALG1L5P-201ENST00000482043 771 ntBASIC16.79■□□□□ 0.28
GCN1Q92616 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC16.79■□□□□ 0.28
GCN1Q92616 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC16.79■□□□□ 0.28
GCN1Q92616 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC16.79■□□□□ 0.28
GCN1Q92616 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
GCN1Q92616 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
GCN1Q92616 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC16.79■□□□□ 0.28
GCN1Q92616 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC16.79■□□□□ 0.28
GCN1Q92616 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
GCN1Q92616 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
GCN1Q92616 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC16.78■□□□□ 0.28
GCN1Q92616 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
GCN1Q92616 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
GCN1Q92616 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
GCN1Q92616 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC16.78■□□□□ 0.28
GCN1Q92616 AC091607.1-201ENST00000490318 1060 ntBASIC16.78■□□□□ 0.28
GCN1Q92616 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC16.78■□□□□ 0.28
GCN1Q92616 AC008608.2-201ENST00000606089 416 ntBASIC16.78■□□□□ 0.28
GCN1Q92616 AC093512.1-201ENST00000617969 520 ntBASIC16.78■□□□□ 0.28
GCN1Q92616 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC16.78■□□□□ 0.28
GCN1Q92616 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
GCN1Q92616 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
GCN1Q92616 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
GCN1Q92616 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
GCN1Q92616 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
GCN1Q92616 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC16.78■□□□□ 0.28
GCN1Q92616 VENTXP7-201ENST00000475503 772 ntBASIC16.78■□□□□ 0.28
GCN1Q92616 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC16.78■□□□□ 0.28
GCN1Q92616 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC16.78■□□□□ 0.28
GCN1Q92616 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
GCN1Q92616 Z83851.2-201ENST00000609564 659 ntBASIC16.78■□□□□ 0.28
GCN1Q92616 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC16.78■□□□□ 0.28
GCN1Q92616 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
GCN1Q92616 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
GCN1Q92616 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
GCN1Q92616 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC16.77■□□□□ 0.28
GCN1Q92616 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC16.77■□□□□ 0.28
GCN1Q92616 KRT8P17-201ENST00000453110 1448 ntBASIC16.77■□□□□ 0.28
GCN1Q92616 MACROD2-AS1-202ENST00000455291 663 ntTSL 2 BASIC16.77■□□□□ 0.28
GCN1Q92616 PARN-205ENST00000539279 1557 ntTSL 2 BASIC16.77■□□□□ 0.27
GCN1Q92616 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC16.77■□□□□ 0.27
GCN1Q92616 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC16.77■□□□□ 0.27
GCN1Q92616 NOP2-220ENST00000545915 630 ntTSL 2 BASIC16.77■□□□□ 0.27
GCN1Q92616 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC16.77■□□□□ 0.27
GCN1Q92616 MIR4469-201ENST00000583919 79 ntBASIC16.77■□□□□ 0.27
GCN1Q92616 AP001269.4-201ENST00000609611 512 ntBASIC16.77■□□□□ 0.27
GCN1Q92616 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
GCN1Q92616 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
GCN1Q92616 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
GCN1Q92616 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
GCN1Q92616 BEX3-201ENST00000361298 921 ntTSL 2 BASIC16.76■□□□□ 0.27
GCN1Q92616 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC16.76■□□□□ 0.27
GCN1Q92616 HIST2H3DP1-201ENST00000401004 416 ntBASIC16.76■□□□□ 0.27
GCN1Q92616 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC16.76■□□□□ 0.27
GCN1Q92616 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC16.76■□□□□ 0.27
GCN1Q92616 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC16.76■□□□□ 0.27
GCN1Q92616 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC16.76■□□□□ 0.27
GCN1Q92616 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
GCN1Q92616 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
GCN1Q92616 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
GCN1Q92616 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
GCN1Q92616 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC16.76■□□□□ 0.27
GCN1Q92616 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC16.76■□□□□ 0.27
GCN1Q92616 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC16.76■□□□□ 0.27
GCN1Q92616 AL591684.3-201ENST00000605187 298 ntBASIC16.76■□□□□ 0.27
GCN1Q92616 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC16.76■□□□□ 0.27
GCN1Q92616 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
GCN1Q92616 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
GCN1Q92616 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
GCN1Q92616 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
GCN1Q92616 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
GCN1Q92616 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC16.75■□□□□ 0.27
GCN1Q92616 TAF8-206ENST00000472818 719 ntTSL 2 BASIC16.75■□□□□ 0.27
GCN1Q92616 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC16.75■□□□□ 0.27
GCN1Q92616 AC005829.1-201ENST00000570002 483 ntBASIC16.75■□□□□ 0.27
GCN1Q92616 AC005336.2-201ENST00000593183 939 ntBASIC16.75■□□□□ 0.27
GCN1Q92616 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
GCN1Q92616 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC16.75■□□□□ 0.27
GCN1Q92616 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
GCN1Q92616 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
GCN1Q92616 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC16.75■□□□□ 0.27
GCN1Q92616 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC16.75■□□□□ 0.27
GCN1Q92616 HLA-J-201ENST00000462773 1622 ntBASIC16.75■□□□□ 0.27
GCN1Q92616 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
GCN1Q92616 KRT18P23-201ENST00000435622 1283 ntBASIC16.75■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms