Protein–RNA interactions for Protein: Q8WWY6

MBD3L1, Methyl-CpG-binding domain protein 3-like 1, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3L1Q8WWY6 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC15.03■□□□□ -0
MBD3L1Q8WWY6 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC15.03■□□□□ -0
MBD3L1Q8WWY6 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
MBD3L1Q8WWY6 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC15.03■□□□□ -0
MBD3L1Q8WWY6 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC15.02■□□□□ -0
MBD3L1Q8WWY6 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC15.02■□□□□ -0
MBD3L1Q8WWY6 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
MBD3L1Q8WWY6 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC15.02■□□□□ -0
MBD3L1Q8WWY6 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
MBD3L1Q8WWY6 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC15.02■□□□□ -0
MBD3L1Q8WWY6 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC15.02■□□□□ -0
MBD3L1Q8WWY6 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
MBD3L1Q8WWY6 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC15.02■□□□□ -0
MBD3L1Q8WWY6 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
MBD3L1Q8WWY6 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC15.02■□□□□ -0
MBD3L1Q8WWY6 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC15.02■□□□□ -0
MBD3L1Q8WWY6 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC15.02■□□□□ -0
MBD3L1Q8WWY6 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
MBD3L1Q8WWY6 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
MBD3L1Q8WWY6 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC15.02■□□□□ -0
MBD3L1Q8WWY6 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
MBD3L1Q8WWY6 AC019069.1-201ENST00000610008 1333 ntBASIC15.02■□□□□ -0
MBD3L1Q8WWY6 AC135279.3-201ENST00000610945 1311 ntBASIC15.02■□□□□ -0
MBD3L1Q8WWY6 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
MBD3L1Q8WWY6 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
MBD3L1Q8WWY6 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
MBD3L1Q8WWY6 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
MBD3L1Q8WWY6 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC15.02■□□□□ -0
MBD3L1Q8WWY6 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC15.02■□□□□ -0
MBD3L1Q8WWY6 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
MBD3L1Q8WWY6 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC15.02■□□□□ -0
MBD3L1Q8WWY6 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC15.02■□□□□ -0
MBD3L1Q8WWY6 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
MBD3L1Q8WWY6 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
MBD3L1Q8WWY6 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC15.02□□□□□ -0.01
MBD3L1Q8WWY6 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
MBD3L1Q8WWY6 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
MBD3L1Q8WWY6 AC012313.1-201ENST00000593393 3059 ntBASIC15.02□□□□□ -0.01
MBD3L1Q8WWY6 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
MBD3L1Q8WWY6 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
MBD3L1Q8WWY6 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC15.02□□□□□ -0.01
MBD3L1Q8WWY6 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC15.02□□□□□ -0.01
MBD3L1Q8WWY6 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
MBD3L1Q8WWY6 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC15.01□□□□□ -0.01
MBD3L1Q8WWY6 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC15.01□□□□□ -0.01
MBD3L1Q8WWY6 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC15.01□□□□□ -0.01
MBD3L1Q8WWY6 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
MBD3L1Q8WWY6 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC15.01□□□□□ -0.01
MBD3L1Q8WWY6 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC15.01□□□□□ -0.01
MBD3L1Q8WWY6 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC15.01□□□□□ -0.01
MBD3L1Q8WWY6 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
MBD3L1Q8WWY6 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
MBD3L1Q8WWY6 FEM1AP3-201ENST00000403722 1741 ntBASIC15.01□□□□□ -0.01
MBD3L1Q8WWY6 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC15.01□□□□□ -0.01
MBD3L1Q8WWY6 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC15.01□□□□□ -0.01
MBD3L1Q8WWY6 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
MBD3L1Q8WWY6 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
MBD3L1Q8WWY6 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
MBD3L1Q8WWY6 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC15.01□□□□□ -0.01
MBD3L1Q8WWY6 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC15.01□□□□□ -0.01
MBD3L1Q8WWY6 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC15.01□□□□□ -0.01
MBD3L1Q8WWY6 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC15.01□□□□□ -0.01
MBD3L1Q8WWY6 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
MBD3L1Q8WWY6 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC15.01□□□□□ -0.01
MBD3L1Q8WWY6 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
MBD3L1Q8WWY6 SLC25A6P5-201ENST00000435663 894 ntBASIC15.01□□□□□ -0.01
MBD3L1Q8WWY6 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC15.01□□□□□ -0.01
MBD3L1Q8WWY6 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
MBD3L1Q8WWY6 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC15.01□□□□□ -0.01
MBD3L1Q8WWY6 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC15.01□□□□□ -0.01
MBD3L1Q8WWY6 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
MBD3L1Q8WWY6 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
MBD3L1Q8WWY6 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC15.01□□□□□ -0.01
MBD3L1Q8WWY6 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC15.01□□□□□ -0.01
MBD3L1Q8WWY6 COBL-210ENST00000632460 1941 ntTSL 5 BASIC15.01□□□□□ -0.01
MBD3L1Q8WWY6 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
MBD3L1Q8WWY6 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
MBD3L1Q8WWY6 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC15.01□□□□□ -0.01
MBD3L1Q8WWY6 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC15.01□□□□□ -0.01
MBD3L1Q8WWY6 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
MBD3L1Q8WWY6 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC15.01□□□□□ -0.01
MBD3L1Q8WWY6 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC15.01□□□□□ -0.01
MBD3L1Q8WWY6 AC018553.1-201ENST00000616682 1458 ntBASIC15.01□□□□□ -0.01
MBD3L1Q8WWY6 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
MBD3L1Q8WWY6 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC15.01□□□□□ -0.01
MBD3L1Q8WWY6 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
MBD3L1Q8WWY6 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC15.01□□□□□ -0.01
MBD3L1Q8WWY6 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC15□□□□□ -0.01
MBD3L1Q8WWY6 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
MBD3L1Q8WWY6 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
MBD3L1Q8WWY6 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC15□□□□□ -0.01
MBD3L1Q8WWY6 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC15□□□□□ -0.01
MBD3L1Q8WWY6 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
MBD3L1Q8WWY6 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
MBD3L1Q8WWY6 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
MBD3L1Q8WWY6 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
MBD3L1Q8WWY6 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
MBD3L1Q8WWY6 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC15□□□□□ -0.01
MBD3L1Q8WWY6 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC15□□□□□ -0.01
MBD3L1Q8WWY6 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC15□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms