Protein–RNA interactions for Protein: Q8WU17

RNF139, E3 ubiquitin-protein ligase RNF139, humanhuman

Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF139Q8WU17 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
RNF139Q8WU17 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC20.12■□□□□ 0.81
RNF139Q8WU17 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
RNF139Q8WU17 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC20.12■□□□□ 0.81
RNF139Q8WU17 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
RNF139Q8WU17 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
RNF139Q8WU17 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
RNF139Q8WU17 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
RNF139Q8WU17 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
RNF139Q8WU17 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
RNF139Q8WU17 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
RNF139Q8WU17 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC20.11■□□□□ 0.81
RNF139Q8WU17 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
RNF139Q8WU17 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC20.11■□□□□ 0.81
RNF139Q8WU17 FAM207BP-201ENST00000447172 505 ntBASIC20.11■□□□□ 0.81
RNF139Q8WU17 AC091390.4-202ENST00000476426 537 ntBASIC20.11■□□□□ 0.81
RNF139Q8WU17 GLRB-205ENST00000512619 728 ntTSL 3 BASIC20.11■□□□□ 0.81
RNF139Q8WU17 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC20.11■□□□□ 0.81
RNF139Q8WU17 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC20.11■□□□□ 0.81
RNF139Q8WU17 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
RNF139Q8WU17 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC20.11■□□□□ 0.81
RNF139Q8WU17 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC20.11■□□□□ 0.81
RNF139Q8WU17 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC20.11■□□□□ 0.81
RNF139Q8WU17 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC20.11■□□□□ 0.81
RNF139Q8WU17 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC20.11■□□□□ 0.81
RNF139Q8WU17 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
RNF139Q8WU17 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
RNF139Q8WU17 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
RNF139Q8WU17 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
RNF139Q8WU17 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
RNF139Q8WU17 AC079598.2-202ENST00000546624 1451 ntBASIC20.11■□□□□ 0.81
RNF139Q8WU17 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC20.1■□□□□ 0.81
RNF139Q8WU17 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
RNF139Q8WU17 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC20.1■□□□□ 0.81
RNF139Q8WU17 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC20.1■□□□□ 0.81
RNF139Q8WU17 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
RNF139Q8WU17 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
RNF139Q8WU17 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC20.1■□□□□ 0.81
RNF139Q8WU17 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
RNF139Q8WU17 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
RNF139Q8WU17 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC20.1■□□□□ 0.81
RNF139Q8WU17 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC20.1■□□□□ 0.81
RNF139Q8WU17 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
RNF139Q8WU17 MIR1238-201ENST00000408483 83 ntBASIC20.1■□□□□ 0.81
RNF139Q8WU17 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC20.1■□□□□ 0.81
RNF139Q8WU17 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC20.1■□□□□ 0.81
RNF139Q8WU17 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
RNF139Q8WU17 SLC25A1P4-201ENST00000567977 778 ntBASIC20.1■□□□□ 0.81
RNF139Q8WU17 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC20.1■□□□□ 0.81
RNF139Q8WU17 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC20.1■□□□□ 0.81
RNF139Q8WU17 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
RNF139Q8WU17 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
RNF139Q8WU17 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
RNF139Q8WU17 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
RNF139Q8WU17 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC20.1■□□□□ 0.81
RNF139Q8WU17 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC20.1■□□□□ 0.81
RNF139Q8WU17 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
RNF139Q8WU17 AC005332.7-201ENST00000614046 2005 ntBASIC20.1■□□□□ 0.81
RNF139Q8WU17 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
RNF139Q8WU17 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC20.1■□□□□ 0.81
RNF139Q8WU17 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
RNF139Q8WU17 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC20.1■□□□□ 0.81
RNF139Q8WU17 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
RNF139Q8WU17 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC20.09■□□□□ 0.81
RNF139Q8WU17 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC20.09■□□□□ 0.81
RNF139Q8WU17 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
RNF139Q8WU17 MMP23A-201ENST00000234610 1017 ntBASIC20.09■□□□□ 0.81
RNF139Q8WU17 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
RNF139Q8WU17 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
RNF139Q8WU17 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
RNF139Q8WU17 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
RNF139Q8WU17 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC20.09■□□□□ 0.81
RNF139Q8WU17 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
RNF139Q8WU17 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
RNF139Q8WU17 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC20.09■□□□□ 0.81
RNF139Q8WU17 AC097488.1-201ENST00000507834 756 ntBASIC20.09■□□□□ 0.81
RNF139Q8WU17 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
RNF139Q8WU17 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC20.09■□□□□ 0.81
RNF139Q8WU17 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC20.09■□□□□ 0.81
RNF139Q8WU17 AP000692.2-201ENST00000608391 879 ntBASIC20.09■□□□□ 0.81
RNF139Q8WU17 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC20.09■□□□□ 0.81
RNF139Q8WU17 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
RNF139Q8WU17 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
RNF139Q8WU17 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC20.09■□□□□ 0.81
RNF139Q8WU17 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
RNF139Q8WU17 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC20.09■□□□□ 0.81
RNF139Q8WU17 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
RNF139Q8WU17 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
RNF139Q8WU17 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC20.09■□□□□ 0.81
RNF139Q8WU17 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
RNF139Q8WU17 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
RNF139Q8WU17 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
RNF139Q8WU17 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC20.08■□□□□ 0.81
RNF139Q8WU17 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
RNF139Q8WU17 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC20.08■□□□□ 0.81
RNF139Q8WU17 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC20.08■□□□□ 0.81
RNF139Q8WU17 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
RNF139Q8WU17 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
RNF139Q8WU17 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
RNF139Q8WU17 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC20.08■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 19.4 ms