Protein–RNA interactions for Protein: Q8TEC5

SH3RF2, Putative E3 ubiquitin-protein ligase SH3RF2, humanhuman

Predictions only

Length 729 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF2Q8TEC5 PRSS44-201ENST00000515154 1146 ntBASIC19.88■□□□□ 0.77
SH3RF2Q8TEC5 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC19.88■□□□□ 0.77
SH3RF2Q8TEC5 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC19.88■□□□□ 0.77
SH3RF2Q8TEC5 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC19.88■□□□□ 0.77
SH3RF2Q8TEC5 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SH3RF2Q8TEC5 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SH3RF2Q8TEC5 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SH3RF2Q8TEC5 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC19.88■□□□□ 0.77
SH3RF2Q8TEC5 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC19.88■□□□□ 0.77
SH3RF2Q8TEC5 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
SH3RF2Q8TEC5 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SH3RF2Q8TEC5 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SH3RF2Q8TEC5 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SH3RF2Q8TEC5 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SH3RF2Q8TEC5 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SH3RF2Q8TEC5 AC063952.2-201ENST00000498792 1227 ntBASIC19.87■□□□□ 0.77
SH3RF2Q8TEC5 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC19.87■□□□□ 0.77
SH3RF2Q8TEC5 AC022616.7-201ENST00000525383 220 ntBASIC19.87■□□□□ 0.77
SH3RF2Q8TEC5 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
SH3RF2Q8TEC5 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
SH3RF2Q8TEC5 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SH3RF2Q8TEC5 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC19.87■□□□□ 0.77
SH3RF2Q8TEC5 AC104417.2-201ENST00000562989 1793 ntBASIC19.87■□□□□ 0.77
SH3RF2Q8TEC5 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
SH3RF2Q8TEC5 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
SH3RF2Q8TEC5 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC19.87■□□□□ 0.77
SH3RF2Q8TEC5 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SH3RF2Q8TEC5 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SH3RF2Q8TEC5 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
SH3RF2Q8TEC5 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
SH3RF2Q8TEC5 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
SH3RF2Q8TEC5 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC19.86■□□□□ 0.77
SH3RF2Q8TEC5 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
SH3RF2Q8TEC5 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
SH3RF2Q8TEC5 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
SH3RF2Q8TEC5 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
SH3RF2Q8TEC5 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SH3RF2Q8TEC5 GUK1-204ENST00000366721 689 ntTSL 3 BASIC19.86■□□□□ 0.77
SH3RF2Q8TEC5 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SH3RF2Q8TEC5 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC19.86■□□□□ 0.77
SH3RF2Q8TEC5 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC19.86■□□□□ 0.77
SH3RF2Q8TEC5 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC19.86■□□□□ 0.77
SH3RF2Q8TEC5 AP003041.3-201ENST00000527151 707 ntBASIC19.86■□□□□ 0.77
SH3RF2Q8TEC5 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC19.86■□□□□ 0.77
SH3RF2Q8TEC5 AC141257.4-201ENST00000634557 245 ntBASIC19.86■□□□□ 0.77
SH3RF2Q8TEC5 AC136944.6-201ENST00000634818 245 ntBASIC19.86■□□□□ 0.77
SH3RF2Q8TEC5 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
SH3RF2Q8TEC5 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SH3RF2Q8TEC5 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC19.86■□□□□ 0.77
SH3RF2Q8TEC5 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SH3RF2Q8TEC5 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
SH3RF2Q8TEC5 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SH3RF2Q8TEC5 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
SH3RF2Q8TEC5 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
SH3RF2Q8TEC5 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
SH3RF2Q8TEC5 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC19.85■□□□□ 0.77
SH3RF2Q8TEC5 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
SH3RF2Q8TEC5 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SH3RF2Q8TEC5 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
SH3RF2Q8TEC5 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
SH3RF2Q8TEC5 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
SH3RF2Q8TEC5 COX11P1-201ENST00000489116 835 ntBASIC19.85■□□□□ 0.77
SH3RF2Q8TEC5 YBX1P2-201ENST00000489612 999 ntBASIC19.85■□□□□ 0.77
SH3RF2Q8TEC5 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC19.85■□□□□ 0.77
SH3RF2Q8TEC5 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC19.85■□□□□ 0.77
SH3RF2Q8TEC5 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SH3RF2Q8TEC5 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC19.85■□□□□ 0.77
SH3RF2Q8TEC5 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
SH3RF2Q8TEC5 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SH3RF2Q8TEC5 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SH3RF2Q8TEC5 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SH3RF2Q8TEC5 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
SH3RF2Q8TEC5 ZNF815P-204ENST00000434898 1737 ntBASIC19.85■□□□□ 0.77
SH3RF2Q8TEC5 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC19.84■□□□□ 0.77
SH3RF2Q8TEC5 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SH3RF2Q8TEC5 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SH3RF2Q8TEC5 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SH3RF2Q8TEC5 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC19.84■□□□□ 0.77
SH3RF2Q8TEC5 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SH3RF2Q8TEC5 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
SH3RF2Q8TEC5 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC19.84■□□□□ 0.77
SH3RF2Q8TEC5 RNF152P1-201ENST00000397754 604 ntBASIC19.84■□□□□ 0.77
SH3RF2Q8TEC5 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC19.84■□□□□ 0.77
SH3RF2Q8TEC5 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
SH3RF2Q8TEC5 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC19.84■□□□□ 0.77
SH3RF2Q8TEC5 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC19.84■□□□□ 0.77
SH3RF2Q8TEC5 LINC01238-205ENST00000567549 1107 ntBASIC19.84■□□□□ 0.77
SH3RF2Q8TEC5 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
SH3RF2Q8TEC5 AL512604.3-201ENST00000569583 964 ntBASIC19.84■□□□□ 0.77
SH3RF2Q8TEC5 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
SH3RF2Q8TEC5 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SH3RF2Q8TEC5 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SH3RF2Q8TEC5 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
SH3RF2Q8TEC5 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC19.84■□□□□ 0.77
SH3RF2Q8TEC5 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC19.84■□□□□ 0.77
SH3RF2Q8TEC5 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SH3RF2Q8TEC5 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC19.84■□□□□ 0.77
SH3RF2Q8TEC5 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC19.83■□□□□ 0.77
SH3RF2Q8TEC5 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.77
SH3RF2Q8TEC5 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 52.6 ms