Protein–RNA interactions for Protein: Q8TD26

CHD6, Chromodomain-helicase-DNA-binding protein 6, humanhuman

Predictions only

Length 2,715 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6Q8TD26 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC17.32■□□□□ 0.36
CHD6Q8TD26 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CHD6Q8TD26 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CHD6Q8TD26 HLA-J-201ENST00000462773 1622 ntBASIC17.31■□□□□ 0.36
CHD6Q8TD26 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CHD6Q8TD26 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC17.31■□□□□ 0.36
CHD6Q8TD26 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC17.31■□□□□ 0.36
CHD6Q8TD26 MACROD2-AS1-202ENST00000455291 663 ntTSL 2 BASIC17.31■□□□□ 0.36
CHD6Q8TD26 PNMT-203ENST00000581428 677 ntTSL 2 BASIC17.31■□□□□ 0.36
CHD6Q8TD26 MIR4469-201ENST00000583919 79 ntBASIC17.31■□□□□ 0.36
CHD6Q8TD26 AC093512.1-201ENST00000617969 520 ntBASIC17.31■□□□□ 0.36
CHD6Q8TD26 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC17.31■□□□□ 0.36
CHD6Q8TD26 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CHD6Q8TD26 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CHD6Q8TD26 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC17.31■□□□□ 0.36
CHD6Q8TD26 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CHD6Q8TD26 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC17.31■□□□□ 0.36
CHD6Q8TD26 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC17.31■□□□□ 0.36
CHD6Q8TD26 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC17.31■□□□□ 0.36
CHD6Q8TD26 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC17.31■□□□□ 0.36
CHD6Q8TD26 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC17.31■□□□□ 0.36
CHD6Q8TD26 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CHD6Q8TD26 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CHD6Q8TD26 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC17.31■□□□□ 0.36
CHD6Q8TD26 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CHD6Q8TD26 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CHD6Q8TD26 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CHD6Q8TD26 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC17.3■□□□□ 0.36
CHD6Q8TD26 RNA5SP416-201ENST00000516838 111 ntBASIC17.3■□□□□ 0.36
CHD6Q8TD26 AC012640.2-201ENST00000561606 901 ntBASIC17.3■□□□□ 0.36
CHD6Q8TD26 AC084346.2-201ENST00000607097 949 ntBASIC17.3■□□□□ 0.36
CHD6Q8TD26 Z83851.2-201ENST00000609564 659 ntBASIC17.3■□□□□ 0.36
CHD6Q8TD26 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CHD6Q8TD26 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC17.3■□□□□ 0.36
CHD6Q8TD26 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CHD6Q8TD26 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC17.3■□□□□ 0.36
CHD6Q8TD26 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC17.3■□□□□ 0.36
CHD6Q8TD26 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CHD6Q8TD26 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC17.3■□□□□ 0.36
CHD6Q8TD26 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CHD6Q8TD26 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC17.3■□□□□ 0.36
CHD6Q8TD26 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CHD6Q8TD26 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC17.3■□□□□ 0.36
CHD6Q8TD26 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CHD6Q8TD26 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC17.3■□□□□ 0.36
CHD6Q8TD26 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC17.29■□□□□ 0.36
CHD6Q8TD26 PARN-205ENST00000539279 1557 ntTSL 2 BASIC17.29■□□□□ 0.36
CHD6Q8TD26 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CHD6Q8TD26 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CHD6Q8TD26 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
CHD6Q8TD26 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
CHD6Q8TD26 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC17.29■□□□□ 0.36
CHD6Q8TD26 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC17.29■□□□□ 0.36
CHD6Q8TD26 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
CHD6Q8TD26 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC17.29■□□□□ 0.36
CHD6Q8TD26 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
CHD6Q8TD26 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC17.29■□□□□ 0.36
CHD6Q8TD26 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CHD6Q8TD26 H19-201ENST00000411754 1788 ntTSL 5 BASIC17.29■□□□□ 0.36
CHD6Q8TD26 ME2-206ENST00000638410 2289 ntTSL 5 BASIC17.29■□□□□ 0.36
CHD6Q8TD26 ME2-210ENST00000639255 2262 ntTSL 5 BASIC17.29■□□□□ 0.36
CHD6Q8TD26 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CHD6Q8TD26 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
CHD6Q8TD26 UBC-206ENST00000538617 1303 ntTSL 5 BASIC17.29■□□□□ 0.36
CHD6Q8TD26 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC17.29■□□□□ 0.36
CHD6Q8TD26 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CHD6Q8TD26 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
CHD6Q8TD26 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CHD6Q8TD26 AC005829.1-201ENST00000570002 483 ntBASIC17.29■□□□□ 0.36
CHD6Q8TD26 AC005336.2-201ENST00000593183 939 ntBASIC17.29■□□□□ 0.36
CHD6Q8TD26 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
CHD6Q8TD26 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CHD6Q8TD26 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
CHD6Q8TD26 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CHD6Q8TD26 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CHD6Q8TD26 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC17.28■□□□□ 0.36
CHD6Q8TD26 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CHD6Q8TD26 GNG2-209ENST00000555472 908 ntAPPRIS P1 TSL 3 BASIC17.28■□□□□ 0.36
CHD6Q8TD26 AP001269.4-201ENST00000609611 512 ntBASIC17.28■□□□□ 0.36
CHD6Q8TD26 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC17.28■□□□□ 0.36
CHD6Q8TD26 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CHD6Q8TD26 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC17.28■□□□□ 0.36
CHD6Q8TD26 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CHD6Q8TD26 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CHD6Q8TD26 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC17.28■□□□□ 0.36
CHD6Q8TD26 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC17.28■□□□□ 0.36
CHD6Q8TD26 NUS1P2-201ENST00000417358 873 ntBASIC17.28■□□□□ 0.36
CHD6Q8TD26 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC17.28■□□□□ 0.36
CHD6Q8TD26 VENTXP7-201ENST00000475503 772 ntBASIC17.28■□□□□ 0.36
CHD6Q8TD26 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC17.28■□□□□ 0.36
CHD6Q8TD26 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CHD6Q8TD26 FAM99A-202ENST00000538190 1989 ntBASIC17.28■□□□□ 0.36
CHD6Q8TD26 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC17.28■□□□□ 0.36
CHD6Q8TD26 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
CHD6Q8TD26 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC17.28■□□□□ 0.36
CHD6Q8TD26 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC17.27■□□□□ 0.36
CHD6Q8TD26 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CHD6Q8TD26 MINOS1P3-201ENST00000457048 203 ntBASIC17.27■□□□□ 0.36
CHD6Q8TD26 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC17.27■□□□□ 0.36
CHD6Q8TD26 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms