Protein–RNA interactions for Protein: Q8TBE3

FNDC9, Fibronectin type III domain-containing protein 9, humanhuman

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC9Q8TBE3 KRT8P9-201ENST00000558927 1449 ntBASIC17.24■□□□□ 0.35
FNDC9Q8TBE3 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
FNDC9Q8TBE3 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
FNDC9Q8TBE3 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
FNDC9Q8TBE3 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC17.24■□□□□ 0.35
FNDC9Q8TBE3 AC008040.2-201ENST00000461049 708 ntBASIC17.24■□□□□ 0.35
FNDC9Q8TBE3 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC17.24■□□□□ 0.35
FNDC9Q8TBE3 FITM1-202ENST00000559294 800 ntBASIC17.24■□□□□ 0.35
FNDC9Q8TBE3 GRAMD4P8-201ENST00000605465 1115 ntBASIC17.24■□□□□ 0.35
FNDC9Q8TBE3 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
FNDC9Q8TBE3 PWWP2AP1-201ENST00000429776 2273 ntBASIC17.24■□□□□ 0.35
FNDC9Q8TBE3 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
FNDC9Q8TBE3 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC17.24■□□□□ 0.35
FNDC9Q8TBE3 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC17.24■□□□□ 0.35
FNDC9Q8TBE3 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
FNDC9Q8TBE3 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
FNDC9Q8TBE3 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
FNDC9Q8TBE3 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC17.24■□□□□ 0.35
FNDC9Q8TBE3 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC17.24■□□□□ 0.35
FNDC9Q8TBE3 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC17.24■□□□□ 0.35
FNDC9Q8TBE3 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
FNDC9Q8TBE3 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
FNDC9Q8TBE3 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
FNDC9Q8TBE3 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC17.23■□□□□ 0.35
FNDC9Q8TBE3 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
FNDC9Q8TBE3 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC17.23■□□□□ 0.35
FNDC9Q8TBE3 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
FNDC9Q8TBE3 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
FNDC9Q8TBE3 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC17.23■□□□□ 0.35
FNDC9Q8TBE3 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC17.23■□□□□ 0.35
FNDC9Q8TBE3 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
FNDC9Q8TBE3 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC17.23■□□□□ 0.35
FNDC9Q8TBE3 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
FNDC9Q8TBE3 AC091390.4-202ENST00000476426 537 ntBASIC17.23■□□□□ 0.35
FNDC9Q8TBE3 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC17.23■□□□□ 0.35
FNDC9Q8TBE3 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC17.23■□□□□ 0.35
FNDC9Q8TBE3 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC17.23■□□□□ 0.35
FNDC9Q8TBE3 LINC01023-201ENST00000606054 436 ntBASIC17.23■□□□□ 0.35
FNDC9Q8TBE3 GLDC-219ENST00000640208 420 ntTSL 2 BASIC17.23■□□□□ 0.35
FNDC9Q8TBE3 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
FNDC9Q8TBE3 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
FNDC9Q8TBE3 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
FNDC9Q8TBE3 AC125437.2-201ENST00000625180 2167 ntBASIC17.23■□□□□ 0.35
FNDC9Q8TBE3 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
FNDC9Q8TBE3 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC17.23■□□□□ 0.35
FNDC9Q8TBE3 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC17.23■□□□□ 0.35
FNDC9Q8TBE3 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC17.23■□□□□ 0.35
FNDC9Q8TBE3 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
FNDC9Q8TBE3 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC17.23■□□□□ 0.35
FNDC9Q8TBE3 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
FNDC9Q8TBE3 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC17.22■□□□□ 0.35
FNDC9Q8TBE3 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC17.22■□□□□ 0.35
FNDC9Q8TBE3 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
FNDC9Q8TBE3 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
FNDC9Q8TBE3 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC17.22■□□□□ 0.35
FNDC9Q8TBE3 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
FNDC9Q8TBE3 FAM207BP-201ENST00000447172 505 ntBASIC17.22■□□□□ 0.35
FNDC9Q8TBE3 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC17.22■□□□□ 0.35
FNDC9Q8TBE3 AC097488.1-201ENST00000507834 756 ntBASIC17.22■□□□□ 0.35
FNDC9Q8TBE3 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
FNDC9Q8TBE3 SLC25A1P4-201ENST00000567977 778 ntBASIC17.22■□□□□ 0.35
FNDC9Q8TBE3 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC17.22■□□□□ 0.35
FNDC9Q8TBE3 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC17.22■□□□□ 0.35
FNDC9Q8TBE3 AP000692.2-201ENST00000608391 879 ntBASIC17.22■□□□□ 0.35
FNDC9Q8TBE3 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC17.22■□□□□ 0.35
FNDC9Q8TBE3 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC17.22■□□□□ 0.35
FNDC9Q8TBE3 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
FNDC9Q8TBE3 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
FNDC9Q8TBE3 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
FNDC9Q8TBE3 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
FNDC9Q8TBE3 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
FNDC9Q8TBE3 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
FNDC9Q8TBE3 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC17.21■□□□□ 0.35
FNDC9Q8TBE3 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
FNDC9Q8TBE3 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC17.21■□□□□ 0.35
FNDC9Q8TBE3 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
FNDC9Q8TBE3 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
FNDC9Q8TBE3 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
FNDC9Q8TBE3 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
FNDC9Q8TBE3 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC17.21■□□□□ 0.35
FNDC9Q8TBE3 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
FNDC9Q8TBE3 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC17.21■□□□□ 0.35
FNDC9Q8TBE3 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC17.21■□□□□ 0.35
FNDC9Q8TBE3 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
FNDC9Q8TBE3 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
FNDC9Q8TBE3 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
FNDC9Q8TBE3 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
FNDC9Q8TBE3 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC17.21■□□□□ 0.35
FNDC9Q8TBE3 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
FNDC9Q8TBE3 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
FNDC9Q8TBE3 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
FNDC9Q8TBE3 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
FNDC9Q8TBE3 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
FNDC9Q8TBE3 CRYGFP-201ENST00000418459 633 ntBASIC17.21■□□□□ 0.35
FNDC9Q8TBE3 DERL1-203ENST00000419562 918 ntTSL 2 BASIC17.21■□□□□ 0.35
FNDC9Q8TBE3 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC17.21■□□□□ 0.35
FNDC9Q8TBE3 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC17.21■□□□□ 0.35
FNDC9Q8TBE3 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC17.21■□□□□ 0.35
FNDC9Q8TBE3 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
FNDC9Q8TBE3 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms