Protein–RNA interactions for Protein: Q8NHG7

SVIP, Small VCP/p97-interacting protein, humanhuman

Predictions only

Length 77 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SVIPQ8NHG7 PADI4-201ENST00000375448 2267 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
SVIPQ8NHG7 RCAN1-214ENST00000620920 2257 ntTSL 4 BASIC12.05□□□□□ -0.48
SVIPQ8NHG7 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
SVIPQ8NHG7 DBN1-203ENST00000393565 2701 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
SVIPQ8NHG7 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC12.05□□□□□ -0.48
SVIPQ8NHG7 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
SVIPQ8NHG7 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC12.05□□□□□ -0.48
SVIPQ8NHG7 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
SVIPQ8NHG7 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC12.05□□□□□ -0.48
SVIPQ8NHG7 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
SVIPQ8NHG7 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
SVIPQ8NHG7 DCUN1D3-202ENST00000563934 1996 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
SVIPQ8NHG7 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
SVIPQ8NHG7 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
SVIPQ8NHG7 FUT6-201ENST00000286955 2847 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
SVIPQ8NHG7 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
SVIPQ8NHG7 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
SVIPQ8NHG7 FRMD6-AS1-201ENST00000617151 2229 ntBASIC12.05□□□□□ -0.48
SVIPQ8NHG7 LMAN2L-202ENST00000377079 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
SVIPQ8NHG7 FUT8-202ENST00000358307 2664 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
SVIPQ8NHG7 DNAJB8-201ENST00000319153 2465 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
SVIPQ8NHG7 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
SVIPQ8NHG7 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
SVIPQ8NHG7 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
SVIPQ8NHG7 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC12.04□□□□□ -0.48
SVIPQ8NHG7 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
SVIPQ8NHG7 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
SVIPQ8NHG7 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC12.04□□□□□ -0.48
SVIPQ8NHG7 AC007686.3-201ENST00000619017 3487 ntBASIC12.04□□□□□ -0.48
SVIPQ8NHG7 AC126755.1-201ENST00000525846 6405 ntBASIC12.04□□□□□ -0.48
SVIPQ8NHG7 TNN-203ENST00000622870 3719 ntTSL 5 BASIC12.04□□□□□ -0.48
SVIPQ8NHG7 AC079447.1-201ENST00000424491 1947 ntAPPRIS P1 TSL 2 BASIC12.04□□□□□ -0.48
SVIPQ8NHG7 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
SVIPQ8NHG7 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
SVIPQ8NHG7 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
SVIPQ8NHG7 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
SVIPQ8NHG7 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
SVIPQ8NHG7 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
SVIPQ8NHG7 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
SVIPQ8NHG7 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC12.04□□□□□ -0.48
SVIPQ8NHG7 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
SVIPQ8NHG7 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
SVIPQ8NHG7 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC12.04□□□□□ -0.48
SVIPQ8NHG7 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
SVIPQ8NHG7 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
SVIPQ8NHG7 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
SVIPQ8NHG7 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
SVIPQ8NHG7 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
SVIPQ8NHG7 AC105917.1-201ENST00000506637 2539 ntBASIC12.04□□□□□ -0.48
SVIPQ8NHG7 PAK1IP1-201ENST00000379568 1800 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
SVIPQ8NHG7 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC12.04□□□□□ -0.48
SVIPQ8NHG7 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
SVIPQ8NHG7 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
SVIPQ8NHG7 MPP4-207ENST00000428900 2320 ntTSL 2 BASIC12.04□□□□□ -0.48
SVIPQ8NHG7 PHYHIP-201ENST00000321613 3099 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
SVIPQ8NHG7 ERVK13-1-207ENST00000569465 3321 ntTSL 2 BASIC12.04□□□□□ -0.48
SVIPQ8NHG7 GLI2-203ENST00000361492 6768 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
SVIPQ8NHG7 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC12.04□□□□□ -0.48
SVIPQ8NHG7 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC12.04□□□□□ -0.48
SVIPQ8NHG7 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
SVIPQ8NHG7 KIF6-203ENST00000394362 2394 ntTSL 5 BASIC12.04□□□□□ -0.48
SVIPQ8NHG7 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
SVIPQ8NHG7 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
SVIPQ8NHG7 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
SVIPQ8NHG7 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
SVIPQ8NHG7 NOX5-203ENST00000448182 2498 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
SVIPQ8NHG7 AC105020.1-201ENST00000435356 2205 ntBASIC12.03□□□□□ -0.48
SVIPQ8NHG7 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC12.03□□□□□ -0.48
SVIPQ8NHG7 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
SVIPQ8NHG7 FEM1AP1-201ENST00000431297 1995 ntBASIC12.03□□□□□ -0.48
SVIPQ8NHG7 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
SVIPQ8NHG7 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC12.03□□□□□ -0.48
SVIPQ8NHG7 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC12.03□□□□□ -0.48
SVIPQ8NHG7 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC12.03□□□□□ -0.48
SVIPQ8NHG7 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
SVIPQ8NHG7 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
SVIPQ8NHG7 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC12.03□□□□□ -0.48
SVIPQ8NHG7 NKILA-202ENST00000614771 2598 ntBASIC12.03□□□□□ -0.48
SVIPQ8NHG7 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
SVIPQ8NHG7 RGL4-201ENST00000290691 2885 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
SVIPQ8NHG7 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
SVIPQ8NHG7 GNPDA1-204ENST00000503794 2622 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
SVIPQ8NHG7 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
SVIPQ8NHG7 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC12.03□□□□□ -0.48
SVIPQ8NHG7 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC12.03□□□□□ -0.48
SVIPQ8NHG7 RFX5-215ENST00000452671 2355 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
SVIPQ8NHG7 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
SVIPQ8NHG7 AC004241.1-201ENST00000547799 3299 ntTSL 5 BASIC12.03□□□□□ -0.48
SVIPQ8NHG7 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
SVIPQ8NHG7 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
SVIPQ8NHG7 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC12.03□□□□□ -0.48
SVIPQ8NHG7 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
SVIPQ8NHG7 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC12.03□□□□□ -0.48
SVIPQ8NHG7 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC12.03□□□□□ -0.48
SVIPQ8NHG7 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
SVIPQ8NHG7 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
SVIPQ8NHG7 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC12.03□□□□□ -0.48
SVIPQ8NHG7 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
SVIPQ8NHG7 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
SVIPQ8NHG7 AC243964.3-201ENST00000623022 2028 ntBASIC12.03□□□□□ -0.48
Retrieved 100 of 98,524 protein–RNA pairs in 58 ms