Protein–RNA interactions for Protein: Q8NF37

LPCAT1, Lysophosphatidylcholine acyltransferase 1, humanhuman

Predictions only

Length 534 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT1Q8NF37 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC19.33■□□□□ 0.69
LPCAT1Q8NF37 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
LPCAT1Q8NF37 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
LPCAT1Q8NF37 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC19.33■□□□□ 0.69
LPCAT1Q8NF37 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC19.33■□□□□ 0.69
LPCAT1Q8NF37 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
LPCAT1Q8NF37 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
LPCAT1Q8NF37 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC19.33■□□□□ 0.68
LPCAT1Q8NF37 B3GAT3P1-201ENST00000471720 806 ntBASIC19.33■□□□□ 0.68
LPCAT1Q8NF37 DHDH-203ENST00000522614 776 ntTSL 5 BASIC19.33■□□□□ 0.68
LPCAT1Q8NF37 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC19.33■□□□□ 0.68
LPCAT1Q8NF37 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC19.33■□□□□ 0.68
LPCAT1Q8NF37 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC19.33■□□□□ 0.68
LPCAT1Q8NF37 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC19.33■□□□□ 0.68
LPCAT1Q8NF37 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC19.33■□□□□ 0.68
LPCAT1Q8NF37 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC19.33■□□□□ 0.68
LPCAT1Q8NF37 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
LPCAT1Q8NF37 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
LPCAT1Q8NF37 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
LPCAT1Q8NF37 AC120498.9-201ENST00000339021 3867 ntBASIC19.33■□□□□ 0.68
LPCAT1Q8NF37 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
LPCAT1Q8NF37 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC19.33■□□□□ 0.68
LPCAT1Q8NF37 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
LPCAT1Q8NF37 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
LPCAT1Q8NF37 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
LPCAT1Q8NF37 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
LPCAT1Q8NF37 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC19.32■□□□□ 0.68
LPCAT1Q8NF37 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
LPCAT1Q8NF37 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC19.32■□□□□ 0.68
LPCAT1Q8NF37 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
LPCAT1Q8NF37 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
LPCAT1Q8NF37 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
LPCAT1Q8NF37 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC19.32■□□□□ 0.68
LPCAT1Q8NF37 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC19.32■□□□□ 0.68
LPCAT1Q8NF37 AC091390.4-202ENST00000476426 537 ntBASIC19.32■□□□□ 0.68
LPCAT1Q8NF37 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC19.32■□□□□ 0.68
LPCAT1Q8NF37 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC19.32■□□□□ 0.68
LPCAT1Q8NF37 AP003071.4-201ENST00000562276 1284 ntBASIC19.32■□□□□ 0.68
LPCAT1Q8NF37 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC19.32■□□□□ 0.68
LPCAT1Q8NF37 MIR4497-201ENST00000583208 89 ntBASIC19.32■□□□□ 0.68
LPCAT1Q8NF37 MIR4785-201ENST00000585005 73 ntBASIC19.32■□□□□ 0.68
LPCAT1Q8NF37 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
LPCAT1Q8NF37 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
LPCAT1Q8NF37 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC19.32■□□□□ 0.68
LPCAT1Q8NF37 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
LPCAT1Q8NF37 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
LPCAT1Q8NF37 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
LPCAT1Q8NF37 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
LPCAT1Q8NF37 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
LPCAT1Q8NF37 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
LPCAT1Q8NF37 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
LPCAT1Q8NF37 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC19.31■□□□□ 0.68
LPCAT1Q8NF37 FSCN1P1-201ENST00000568912 1481 ntBASIC19.31■□□□□ 0.68
LPCAT1Q8NF37 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
LPCAT1Q8NF37 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
LPCAT1Q8NF37 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
LPCAT1Q8NF37 MESTP1-201ENST00000404287 994 ntBASIC19.31■□□□□ 0.68
LPCAT1Q8NF37 DERL1-203ENST00000419562 918 ntTSL 2 BASIC19.31■□□□□ 0.68
LPCAT1Q8NF37 AL596275.1-201ENST00000423464 877 ntBASIC19.31■□□□□ 0.68
LPCAT1Q8NF37 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
LPCAT1Q8NF37 AC008040.2-201ENST00000461049 708 ntBASIC19.31■□□□□ 0.68
LPCAT1Q8NF37 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
LPCAT1Q8NF37 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC19.31■□□□□ 0.68
LPCAT1Q8NF37 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC19.31■□□□□ 0.68
LPCAT1Q8NF37 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
LPCAT1Q8NF37 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
LPCAT1Q8NF37 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC19.31■□□□□ 0.68
LPCAT1Q8NF37 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
LPCAT1Q8NF37 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
LPCAT1Q8NF37 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
LPCAT1Q8NF37 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC19.31■□□□□ 0.68
LPCAT1Q8NF37 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
LPCAT1Q8NF37 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
LPCAT1Q8NF37 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
LPCAT1Q8NF37 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
LPCAT1Q8NF37 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC19.3■□□□□ 0.68
LPCAT1Q8NF37 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
LPCAT1Q8NF37 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
LPCAT1Q8NF37 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
LPCAT1Q8NF37 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
LPCAT1Q8NF37 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC19.3■□□□□ 0.68
LPCAT1Q8NF37 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC19.3■□□□□ 0.68
LPCAT1Q8NF37 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC19.3■□□□□ 0.68
LPCAT1Q8NF37 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC19.3■□□□□ 0.68
LPCAT1Q8NF37 REXO1L10P-201ENST00000615707 1290 ntBASIC19.3■□□□□ 0.68
LPCAT1Q8NF37 REXO1L12P-201ENST00000622156 912 ntBASIC19.3■□□□□ 0.68
LPCAT1Q8NF37 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
LPCAT1Q8NF37 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
LPCAT1Q8NF37 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC19.3■□□□□ 0.68
LPCAT1Q8NF37 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC19.3■□□□□ 0.68
LPCAT1Q8NF37 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
LPCAT1Q8NF37 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC19.3■□□□□ 0.68
LPCAT1Q8NF37 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC19.3■□□□□ 0.68
LPCAT1Q8NF37 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
LPCAT1Q8NF37 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
LPCAT1Q8NF37 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
LPCAT1Q8NF37 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC19.3■□□□□ 0.68
LPCAT1Q8NF37 AC141586.3-201ENST00000562166 1838 ntBASIC19.3■□□□□ 0.68
LPCAT1Q8NF37 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
LPCAT1Q8NF37 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms