Protein–RNA interactions for Protein: Q8NDZ2

SIMC1, SUMO-interacting motif-containing protein 1, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1Q8NDZ2 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC18.05■□□□□ 0.48
SIMC1Q8NDZ2 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC18.05■□□□□ 0.48
SIMC1Q8NDZ2 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SIMC1Q8NDZ2 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC18.05■□□□□ 0.48
SIMC1Q8NDZ2 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
SIMC1Q8NDZ2 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC18.05■□□□□ 0.48
SIMC1Q8NDZ2 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
SIMC1Q8NDZ2 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
SIMC1Q8NDZ2 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
SIMC1Q8NDZ2 HTR7P1-201ENST00000538670 1336 ntBASIC18.04■□□□□ 0.48
SIMC1Q8NDZ2 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SIMC1Q8NDZ2 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC18.04■□□□□ 0.48
SIMC1Q8NDZ2 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
SIMC1Q8NDZ2 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
SIMC1Q8NDZ2 TEX21P-204ENST00000641479 1693 ntBASIC18.04■□□□□ 0.48
SIMC1Q8NDZ2 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
SIMC1Q8NDZ2 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SIMC1Q8NDZ2 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
SIMC1Q8NDZ2 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC18.04■□□□□ 0.48
SIMC1Q8NDZ2 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC18.04■□□□□ 0.48
SIMC1Q8NDZ2 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC18.04■□□□□ 0.48
SIMC1Q8NDZ2 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC18.04■□□□□ 0.48
SIMC1Q8NDZ2 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SIMC1Q8NDZ2 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC18.04■□□□□ 0.48
SIMC1Q8NDZ2 CABP2-204ENST00000636477 941 ntTSL 5 BASIC18.04■□□□□ 0.48
SIMC1Q8NDZ2 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SIMC1Q8NDZ2 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SIMC1Q8NDZ2 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SIMC1Q8NDZ2 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC18.04■□□□□ 0.48
SIMC1Q8NDZ2 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
SIMC1Q8NDZ2 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
SIMC1Q8NDZ2 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC18.04■□□□□ 0.48
SIMC1Q8NDZ2 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
SIMC1Q8NDZ2 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC18.04■□□□□ 0.48
SIMC1Q8NDZ2 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
SIMC1Q8NDZ2 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC18.04■□□□□ 0.48
SIMC1Q8NDZ2 WAC-202ENST00000347934 2839 ntTSL 5 BASIC18.04■□□□□ 0.48
SIMC1Q8NDZ2 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SIMC1Q8NDZ2 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SIMC1Q8NDZ2 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC18.03■□□□□ 0.48
SIMC1Q8NDZ2 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
SIMC1Q8NDZ2 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SIMC1Q8NDZ2 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
SIMC1Q8NDZ2 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
SIMC1Q8NDZ2 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SIMC1Q8NDZ2 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
SIMC1Q8NDZ2 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC18.03■□□□□ 0.48
SIMC1Q8NDZ2 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC18.03■□□□□ 0.48
SIMC1Q8NDZ2 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC18.03■□□□□ 0.48
SIMC1Q8NDZ2 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
SIMC1Q8NDZ2 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC18.03■□□□□ 0.48
SIMC1Q8NDZ2 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SIMC1Q8NDZ2 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC18.03■□□□□ 0.48
SIMC1Q8NDZ2 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SIMC1Q8NDZ2 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC18.03■□□□□ 0.48
SIMC1Q8NDZ2 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC18.03■□□□□ 0.48
SIMC1Q8NDZ2 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
SIMC1Q8NDZ2 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SIMC1Q8NDZ2 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC18.02■□□□□ 0.48
SIMC1Q8NDZ2 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
SIMC1Q8NDZ2 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
SIMC1Q8NDZ2 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC18.02■□□□□ 0.48
SIMC1Q8NDZ2 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC18.02■□□□□ 0.48
SIMC1Q8NDZ2 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
SIMC1Q8NDZ2 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
SIMC1Q8NDZ2 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
SIMC1Q8NDZ2 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
SIMC1Q8NDZ2 RPS2P4-201ENST00000476944 856 ntBASIC18.02■□□□□ 0.48
SIMC1Q8NDZ2 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
SIMC1Q8NDZ2 FDX2-207ENST00000494368 584 ntTSL 4 BASIC18.02■□□□□ 0.48
SIMC1Q8NDZ2 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC18.02■□□□□ 0.48
SIMC1Q8NDZ2 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC18.02■□□□□ 0.48
SIMC1Q8NDZ2 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC18.02■□□□□ 0.48
SIMC1Q8NDZ2 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.47
SIMC1Q8NDZ2 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
SIMC1Q8NDZ2 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
SIMC1Q8NDZ2 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC18.02■□□□□ 0.47
SIMC1Q8NDZ2 AP000974.1-201ENST00000623909 2387 ntBASIC18.02■□□□□ 0.47
SIMC1Q8NDZ2 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC18.02■□□□□ 0.47
SIMC1Q8NDZ2 AC020916.1-201ENST00000587762 1774 ntBASIC18.02■□□□□ 0.47
SIMC1Q8NDZ2 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC18.01■□□□□ 0.47
SIMC1Q8NDZ2 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
SIMC1Q8NDZ2 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SIMC1Q8NDZ2 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC18.01■□□□□ 0.47
SIMC1Q8NDZ2 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SIMC1Q8NDZ2 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
SIMC1Q8NDZ2 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
SIMC1Q8NDZ2 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC18.01■□□□□ 0.47
SIMC1Q8NDZ2 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SIMC1Q8NDZ2 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
SIMC1Q8NDZ2 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC18.01■□□□□ 0.47
SIMC1Q8NDZ2 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
SIMC1Q8NDZ2 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC18.01■□□□□ 0.47
SIMC1Q8NDZ2 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC18.01■□□□□ 0.47
SIMC1Q8NDZ2 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC18.01■□□□□ 0.47
SIMC1Q8NDZ2 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC18.01■□□□□ 0.47
SIMC1Q8NDZ2 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SIMC1Q8NDZ2 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
SIMC1Q8NDZ2 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SIMC1Q8NDZ2 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC18.01■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms