Protein–RNA interactions for Protein: Q8NBS3

SLC4A11, Sodium bicarbonate transporter-like protein 11, humanhuman

Predictions only

Length 891 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC4A11Q8NBS3 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SLC4A11Q8NBS3 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
SLC4A11Q8NBS3 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
SLC4A11Q8NBS3 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
SLC4A11Q8NBS3 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC20.33■□□□□ 0.85
SLC4A11Q8NBS3 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
SLC4A11Q8NBS3 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC20.33■□□□□ 0.85
SLC4A11Q8NBS3 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
SLC4A11Q8NBS3 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
SLC4A11Q8NBS3 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC20.33■□□□□ 0.85
SLC4A11Q8NBS3 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC20.33■□□□□ 0.85
SLC4A11Q8NBS3 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
SLC4A11Q8NBS3 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC20.33■□□□□ 0.84
SLC4A11Q8NBS3 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
SLC4A11Q8NBS3 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC20.33■□□□□ 0.84
SLC4A11Q8NBS3 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.84
SLC4A11Q8NBS3 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.84
SLC4A11Q8NBS3 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
SLC4A11Q8NBS3 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.84
SLC4A11Q8NBS3 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
SLC4A11Q8NBS3 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC20.32■□□□□ 0.84
SLC4A11Q8NBS3 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC20.32■□□□□ 0.84
SLC4A11Q8NBS3 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
SLC4A11Q8NBS3 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC20.32■□□□□ 0.84
SLC4A11Q8NBS3 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SLC4A11Q8NBS3 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SLC4A11Q8NBS3 UNC93B2-201ENST00000285383 730 ntBASIC20.32■□□□□ 0.84
SLC4A11Q8NBS3 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC20.32■□□□□ 0.84
SLC4A11Q8NBS3 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
SLC4A11Q8NBS3 FDX2-206ENST00000492239 773 ntTSL 2 BASIC20.32■□□□□ 0.84
SLC4A11Q8NBS3 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC20.32■□□□□ 0.84
SLC4A11Q8NBS3 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC20.32■□□□□ 0.84
SLC4A11Q8NBS3 PRSS44-201ENST00000515154 1146 ntBASIC20.32■□□□□ 0.84
SLC4A11Q8NBS3 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC20.32■□□□□ 0.84
SLC4A11Q8NBS3 CKBP1-201ENST00000565489 1086 ntBASIC20.32■□□□□ 0.84
SLC4A11Q8NBS3 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC20.32■□□□□ 0.84
SLC4A11Q8NBS3 AP000525.1-201ENST00000608286 694 ntBASIC20.32■□□□□ 0.84
SLC4A11Q8NBS3 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
SLC4A11Q8NBS3 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SLC4A11Q8NBS3 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
SLC4A11Q8NBS3 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
SLC4A11Q8NBS3 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
SLC4A11Q8NBS3 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC20.32■□□□□ 0.84
SLC4A11Q8NBS3 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SLC4A11Q8NBS3 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC20.32■□□□□ 0.84
SLC4A11Q8NBS3 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
SLC4A11Q8NBS3 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
SLC4A11Q8NBS3 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
SLC4A11Q8NBS3 AL161938.1-201ENST00000569833 2180 ntBASIC20.31■□□□□ 0.84
SLC4A11Q8NBS3 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SLC4A11Q8NBS3 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
SLC4A11Q8NBS3 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SLC4A11Q8NBS3 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
SLC4A11Q8NBS3 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
SLC4A11Q8NBS3 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
SLC4A11Q8NBS3 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC20.31■□□□□ 0.84
SLC4A11Q8NBS3 AC097488.1-201ENST00000507834 756 ntBASIC20.31■□□□□ 0.84
SLC4A11Q8NBS3 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
SLC4A11Q8NBS3 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC20.31■□□□□ 0.84
SLC4A11Q8NBS3 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC20.31■□□□□ 0.84
SLC4A11Q8NBS3 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC20.31■□□□□ 0.84
SLC4A11Q8NBS3 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC20.31■□□□□ 0.84
SLC4A11Q8NBS3 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC20.31■□□□□ 0.84
SLC4A11Q8NBS3 AC096733.2-201ENST00000609937 1394 ntBASIC20.31■□□□□ 0.84
SLC4A11Q8NBS3 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC20.31■□□□□ 0.84
SLC4A11Q8NBS3 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
SLC4A11Q8NBS3 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
SLC4A11Q8NBS3 FEM1AP3-201ENST00000403722 1741 ntBASIC20.3■□□□□ 0.84
SLC4A11Q8NBS3 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
SLC4A11Q8NBS3 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SLC4A11Q8NBS3 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SLC4A11Q8NBS3 UBQLN4P1-201ENST00000461599 1801 ntBASIC20.3■□□□□ 0.84
SLC4A11Q8NBS3 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SLC4A11Q8NBS3 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC20.3■□□□□ 0.84
SLC4A11Q8NBS3 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SLC4A11Q8NBS3 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC20.3■□□□□ 0.84
SLC4A11Q8NBS3 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
SLC4A11Q8NBS3 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC20.3■□□□□ 0.84
SLC4A11Q8NBS3 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
SLC4A11Q8NBS3 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
SLC4A11Q8NBS3 SLC25A1P4-201ENST00000567977 778 ntBASIC20.3■□□□□ 0.84
SLC4A11Q8NBS3 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC20.3■□□□□ 0.84
SLC4A11Q8NBS3 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
SLC4A11Q8NBS3 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC20.3■□□□□ 0.84
SLC4A11Q8NBS3 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC20.3■□□□□ 0.84
SLC4A11Q8NBS3 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SLC4A11Q8NBS3 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
SLC4A11Q8NBS3 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC20.3■□□□□ 0.84
SLC4A11Q8NBS3 FP475955.4-201ENST00000623131 1990 ntBASIC20.3■□□□□ 0.84
SLC4A11Q8NBS3 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC20.3■□□□□ 0.84
SLC4A11Q8NBS3 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SLC4A11Q8NBS3 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC20.3■□□□□ 0.84
SLC4A11Q8NBS3 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SLC4A11Q8NBS3 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SLC4A11Q8NBS3 AL049812.1-201ENST00000432563 2267 ntBASIC20.29■□□□□ 0.84
SLC4A11Q8NBS3 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC20.29■□□□□ 0.84
SLC4A11Q8NBS3 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC20.29■□□□□ 0.84
SLC4A11Q8NBS3 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
SLC4A11Q8NBS3 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SLC4A11Q8NBS3 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms