Protein–RNA interactions for Protein: Q8NA47

CCDC63, Coiled-coil domain-containing protein 63, humanhuman

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC63Q8NA47 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CCDC63Q8NA47 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC19.42■□□□□ 0.7
CCDC63Q8NA47 AC068880.1-201ENST00000507289 2297 ntBASIC19.42■□□□□ 0.7
CCDC63Q8NA47 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
CCDC63Q8NA47 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CCDC63Q8NA47 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC19.42■□□□□ 0.7
CCDC63Q8NA47 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CCDC63Q8NA47 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CCDC63Q8NA47 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CCDC63Q8NA47 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
CCDC63Q8NA47 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC19.42■□□□□ 0.7
CCDC63Q8NA47 AC090164.3-201ENST00000610780 2143 ntBASIC19.42■□□□□ 0.7
CCDC63Q8NA47 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CCDC63Q8NA47 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC19.41■□□□□ 0.7
CCDC63Q8NA47 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC63Q8NA47 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC19.41■□□□□ 0.7
CCDC63Q8NA47 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC63Q8NA47 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC63Q8NA47 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
CCDC63Q8NA47 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC63Q8NA47 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC63Q8NA47 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC63Q8NA47 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
CCDC63Q8NA47 AL355472.2-201ENST00000422958 438 ntBASIC19.41■□□□□ 0.7
CCDC63Q8NA47 AC034268.1-201ENST00000441047 882 ntBASIC19.41■□□□□ 0.7
CCDC63Q8NA47 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC19.41■□□□□ 0.7
CCDC63Q8NA47 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC19.41■□□□□ 0.7
CCDC63Q8NA47 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
CCDC63Q8NA47 CYP2T3P-201ENST00000601990 817 ntBASIC19.41■□□□□ 0.7
CCDC63Q8NA47 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
CCDC63Q8NA47 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC19.41■□□□□ 0.7
CCDC63Q8NA47 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC63Q8NA47 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
CCDC63Q8NA47 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC19.41■□□□□ 0.7
CCDC63Q8NA47 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
CCDC63Q8NA47 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC19.41■□□□□ 0.7
CCDC63Q8NA47 AC068338.2-201ENST00000563278 1430 ntBASIC19.41■□□□□ 0.7
CCDC63Q8NA47 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC19.41■□□□□ 0.7
CCDC63Q8NA47 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
CCDC63Q8NA47 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC63Q8NA47 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC63Q8NA47 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC19.41■□□□□ 0.7
CCDC63Q8NA47 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC63Q8NA47 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC63Q8NA47 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
CCDC63Q8NA47 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC63Q8NA47 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC63Q8NA47 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC63Q8NA47 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC19.4■□□□□ 0.7
CCDC63Q8NA47 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC19.4■□□□□ 0.7
CCDC63Q8NA47 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC63Q8NA47 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC63Q8NA47 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC63Q8NA47 AC069236.1-201ENST00000604339 616 ntBASIC19.4■□□□□ 0.7
CCDC63Q8NA47 AC008694.1-202ENST00000636953 945 ntBASIC19.4■□□□□ 0.7
CCDC63Q8NA47 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC19.4■□□□□ 0.7
CCDC63Q8NA47 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC63Q8NA47 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC63Q8NA47 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC63Q8NA47 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC63Q8NA47 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC19.4■□□□□ 0.7
CCDC63Q8NA47 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC19.4■□□□□ 0.7
CCDC63Q8NA47 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC19.4■□□□□ 0.7
CCDC63Q8NA47 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC63Q8NA47 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC63Q8NA47 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC19.4■□□□□ 0.7
CCDC63Q8NA47 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC19.4■□□□□ 0.7
CCDC63Q8NA47 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC19.4■□□□□ 0.7
CCDC63Q8NA47 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
CCDC63Q8NA47 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
CCDC63Q8NA47 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.7
CCDC63Q8NA47 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
CCDC63Q8NA47 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC19.39■□□□□ 0.7
CCDC63Q8NA47 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC63Q8NA47 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
CCDC63Q8NA47 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
CCDC63Q8NA47 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC19.39■□□□□ 0.69
CCDC63Q8NA47 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
CCDC63Q8NA47 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC63Q8NA47 AC016769.1-201ENST00000409132 1010 ntBASIC19.39■□□□□ 0.69
CCDC63Q8NA47 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC63Q8NA47 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC19.39■□□□□ 0.69
CCDC63Q8NA47 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC63Q8NA47 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC19.39■□□□□ 0.69
CCDC63Q8NA47 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
CCDC63Q8NA47 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC63Q8NA47 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC63Q8NA47 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC63Q8NA47 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC63Q8NA47 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC63Q8NA47 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
CCDC63Q8NA47 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC63Q8NA47 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC19.39■□□□□ 0.69
CCDC63Q8NA47 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC63Q8NA47 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC63Q8NA47 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC63Q8NA47 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC19.39■□□□□ 0.69
CCDC63Q8NA47 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC63Q8NA47 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC63Q8NA47 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms