Protein–RNA interactions for Protein: Q8N5M4

TTC9C, Tetratricopeptide repeat protein 9C, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC9CQ8N5M4 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
TTC9CQ8N5M4 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
TTC9CQ8N5M4 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
TTC9CQ8N5M4 ITM2C-210ENST00000620962 501 ntBASIC15.14■□□□□ 0.01
TTC9CQ8N5M4 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC15.14■□□□□ 0.01
TTC9CQ8N5M4 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TTC9CQ8N5M4 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC15.14■□□□□ 0.01
TTC9CQ8N5M4 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC15.14■□□□□ 0.01
TTC9CQ8N5M4 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
TTC9CQ8N5M4 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TTC9CQ8N5M4 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
TTC9CQ8N5M4 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
TTC9CQ8N5M4 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC15.13■□□□□ 0.01
TTC9CQ8N5M4 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
TTC9CQ8N5M4 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TTC9CQ8N5M4 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC15.13■□□□□ 0.01
TTC9CQ8N5M4 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
TTC9CQ8N5M4 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC15.13■□□□□ 0.01
TTC9CQ8N5M4 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TTC9CQ8N5M4 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TTC9CQ8N5M4 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TTC9CQ8N5M4 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
TTC9CQ8N5M4 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TTC9CQ8N5M4 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
TTC9CQ8N5M4 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC15.13■□□□□ 0.01
TTC9CQ8N5M4 RPPH1-201ENST00000516869 333 ntBASIC15.13■□□□□ 0.01
TTC9CQ8N5M4 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC15.13■□□□□ 0.01
TTC9CQ8N5M4 RNF121-214ENST00000533380 870 ntTSL 3 BASIC15.13■□□□□ 0.01
TTC9CQ8N5M4 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
TTC9CQ8N5M4 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC15.13■□□□□ 0.01
TTC9CQ8N5M4 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC15.13■□□□□ 0.01
TTC9CQ8N5M4 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
TTC9CQ8N5M4 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TTC9CQ8N5M4 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TTC9CQ8N5M4 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
TTC9CQ8N5M4 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TTC9CQ8N5M4 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
TTC9CQ8N5M4 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
TTC9CQ8N5M4 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TTC9CQ8N5M4 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC15.12■□□□□ 0.01
TTC9CQ8N5M4 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TTC9CQ8N5M4 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
TTC9CQ8N5M4 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
TTC9CQ8N5M4 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
TTC9CQ8N5M4 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TTC9CQ8N5M4 KRT18P29-201ENST00000397031 1267 ntBASIC15.12■□□□□ 0.01
TTC9CQ8N5M4 TSPY20P-201ENST00000450910 630 ntBASIC15.12■□□□□ 0.01
TTC9CQ8N5M4 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC15.12■□□□□ 0.01
TTC9CQ8N5M4 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC15.12■□□□□ 0.01
TTC9CQ8N5M4 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC15.12■□□□□ 0.01
TTC9CQ8N5M4 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC15.12■□□□□ 0.01
TTC9CQ8N5M4 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC15.12■□□□□ 0.01
TTC9CQ8N5M4 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC15.12■□□□□ 0.01
TTC9CQ8N5M4 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
TTC9CQ8N5M4 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
TTC9CQ8N5M4 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TTC9CQ8N5M4 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC15.12■□□□□ 0.01
TTC9CQ8N5M4 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC15.12■□□□□ 0.01
TTC9CQ8N5M4 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
TTC9CQ8N5M4 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
TTC9CQ8N5M4 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC15.11■□□□□ 0.01
TTC9CQ8N5M4 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
TTC9CQ8N5M4 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TTC9CQ8N5M4 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
TTC9CQ8N5M4 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC15.11■□□□□ 0.01
TTC9CQ8N5M4 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TTC9CQ8N5M4 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
TTC9CQ8N5M4 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
TTC9CQ8N5M4 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC15.11■□□□□ 0.01
TTC9CQ8N5M4 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC15.11■□□□□ 0.01
TTC9CQ8N5M4 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC15.11■□□□□ 0.01
TTC9CQ8N5M4 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
TTC9CQ8N5M4 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC15.11■□□□□ 0.01
TTC9CQ8N5M4 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC15.11■□□□□ 0.01
TTC9CQ8N5M4 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
TTC9CQ8N5M4 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC15.11■□□□□ 0.01
TTC9CQ8N5M4 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC15.11■□□□□ 0.01
TTC9CQ8N5M4 AL353708.3-201ENST00000610272 989 ntBASIC15.11■□□□□ 0.01
TTC9CQ8N5M4 AL445675.2-201ENST00000620291 557 ntBASIC15.11■□□□□ 0.01
TTC9CQ8N5M4 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC15.11■□□□□ 0.01
TTC9CQ8N5M4 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC15.11■□□□□ 0.01
TTC9CQ8N5M4 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
TTC9CQ8N5M4 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
TTC9CQ8N5M4 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC15.11■□□□□ 0.01
TTC9CQ8N5M4 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
TTC9CQ8N5M4 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
TTC9CQ8N5M4 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TTC9CQ8N5M4 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
TTC9CQ8N5M4 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
TTC9CQ8N5M4 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TTC9CQ8N5M4 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
TTC9CQ8N5M4 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC15.11■□□□□ 0.01
TTC9CQ8N5M4 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
TTC9CQ8N5M4 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC15.1■□□□□ 0.01
TTC9CQ8N5M4 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
TTC9CQ8N5M4 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
TTC9CQ8N5M4 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
TTC9CQ8N5M4 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
TTC9CQ8N5M4 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TTC9CQ8N5M4 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC15.1■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms