Protein–RNA interactions for Protein: Q8IZH2

XRN1, 5'-3' exoribonuclease 1, humanhuman

Known RBP Predictions only

Length 1,706 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1Q8IZH2 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC26.64■■□□□ 1.86
XRN1Q8IZH2 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
XRN1Q8IZH2 ZNF815P-204ENST00000434898 1737 ntBASIC26.64■■□□□ 1.86
XRN1Q8IZH2 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC26.64■■□□□ 1.86
XRN1Q8IZH2 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
XRN1Q8IZH2 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
XRN1Q8IZH2 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
XRN1Q8IZH2 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC26.64■■□□□ 1.86
XRN1Q8IZH2 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC26.64■■□□□ 1.86
XRN1Q8IZH2 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.85
XRN1Q8IZH2 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC26.64■■□□□ 1.85
XRN1Q8IZH2 MRPL3P1-201ENST00000400109 1033 ntBASIC26.64■■□□□ 1.85
XRN1Q8IZH2 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC26.64■■□□□ 1.85
XRN1Q8IZH2 LINC00265-3P-201ENST00000447588 903 ntBASIC26.64■■□□□ 1.85
XRN1Q8IZH2 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC26.64■■□□□ 1.85
XRN1Q8IZH2 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC26.64■■□□□ 1.85
XRN1Q8IZH2 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC26.64■■□□□ 1.85
XRN1Q8IZH2 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC26.64■■□□□ 1.85
XRN1Q8IZH2 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.85
XRN1Q8IZH2 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC26.64■■□□□ 1.85
XRN1Q8IZH2 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.85
XRN1Q8IZH2 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC26.63■■□□□ 1.85
XRN1Q8IZH2 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
XRN1Q8IZH2 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
XRN1Q8IZH2 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
XRN1Q8IZH2 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC26.63■■□□□ 1.85
XRN1Q8IZH2 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
XRN1Q8IZH2 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC26.63■■□□□ 1.85
XRN1Q8IZH2 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC26.63■■□□□ 1.85
XRN1Q8IZH2 PNN-202ENST00000553331 656 ntTSL 3 BASIC26.63■■□□□ 1.85
XRN1Q8IZH2 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC26.63■■□□□ 1.85
XRN1Q8IZH2 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
XRN1Q8IZH2 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
XRN1Q8IZH2 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
XRN1Q8IZH2 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
XRN1Q8IZH2 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC26.63■■□□□ 1.85
XRN1Q8IZH2 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
XRN1Q8IZH2 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
XRN1Q8IZH2 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
XRN1Q8IZH2 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC26.63■■□□□ 1.85
XRN1Q8IZH2 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC26.63■■□□□ 1.85
XRN1Q8IZH2 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC26.63■■□□□ 1.85
XRN1Q8IZH2 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC26.63■■□□□ 1.85
XRN1Q8IZH2 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
XRN1Q8IZH2 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC26.62■■□□□ 1.85
XRN1Q8IZH2 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC26.62■■□□□ 1.85
XRN1Q8IZH2 AKR1C7P-201ENST00000305623 895 ntBASIC26.62■■□□□ 1.85
XRN1Q8IZH2 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
XRN1Q8IZH2 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC26.62■■□□□ 1.85
XRN1Q8IZH2 GAS2L1P1-201ENST00000420145 1480 ntBASIC26.62■■□□□ 1.85
XRN1Q8IZH2 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
XRN1Q8IZH2 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC26.62■■□□□ 1.85
XRN1Q8IZH2 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC26.62■■□□□ 1.85
XRN1Q8IZH2 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC26.62■■□□□ 1.85
XRN1Q8IZH2 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
XRN1Q8IZH2 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC26.62■■□□□ 1.85
XRN1Q8IZH2 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
XRN1Q8IZH2 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC26.62■■□□□ 1.85
XRN1Q8IZH2 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC26.62■■□□□ 1.85
XRN1Q8IZH2 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC26.62■■□□□ 1.85
XRN1Q8IZH2 GPALPP1-207ENST00000611650 899 ntBASIC26.62■■□□□ 1.85
XRN1Q8IZH2 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC26.62■■□□□ 1.85
XRN1Q8IZH2 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC26.62■■□□□ 1.85
XRN1Q8IZH2 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC26.62■■□□□ 1.85
XRN1Q8IZH2 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
XRN1Q8IZH2 UBC-206ENST00000538617 1303 ntTSL 5 BASIC26.61■■□□□ 1.85
XRN1Q8IZH2 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC26.61■■□□□ 1.85
XRN1Q8IZH2 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC26.61■■□□□ 1.85
XRN1Q8IZH2 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
XRN1Q8IZH2 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
XRN1Q8IZH2 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
XRN1Q8IZH2 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
XRN1Q8IZH2 DET1-207ENST00000564406 2315 ntTSL 2 BASIC26.61■■□□□ 1.85
XRN1Q8IZH2 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
XRN1Q8IZH2 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
XRN1Q8IZH2 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
XRN1Q8IZH2 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC26.61■■□□□ 1.85
XRN1Q8IZH2 MCCD1P1-208ENST00000445732 328 ntBASIC26.61■■□□□ 1.85
XRN1Q8IZH2 KRT18P31-201ENST00000506277 1292 ntBASIC26.61■■□□□ 1.85
XRN1Q8IZH2 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC26.61■■□□□ 1.85
XRN1Q8IZH2 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC26.61■■□□□ 1.85
XRN1Q8IZH2 LINC00565-201ENST00000562710 2331 ntBASIC26.61■■□□□ 1.85
XRN1Q8IZH2 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC26.61■■□□□ 1.85
XRN1Q8IZH2 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
XRN1Q8IZH2 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
XRN1Q8IZH2 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
XRN1Q8IZH2 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC26.6■■□□□ 1.85
XRN1Q8IZH2 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC26.6■■□□□ 1.85
XRN1Q8IZH2 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
XRN1Q8IZH2 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC26.6■■□□□ 1.85
XRN1Q8IZH2 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC26.6■■□□□ 1.85
XRN1Q8IZH2 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC26.6■■□□□ 1.85
XRN1Q8IZH2 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC26.6■■□□□ 1.85
XRN1Q8IZH2 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
XRN1Q8IZH2 AC120114.3-201ENST00000611923 658 ntBASIC26.59■■□□□ 1.85
XRN1Q8IZH2 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC26.59■■□□□ 1.85
XRN1Q8IZH2 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC26.59■■□□□ 1.85
XRN1Q8IZH2 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
XRN1Q8IZH2 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC26.59■■□□□ 1.85
XRN1Q8IZH2 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC26.59■■□□□ 1.85
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms