Protein–RNA interactions for Protein: Q8IXQ3

C9orf40, Uncharacterized protein C9orf40, humanhuman

Predictions only

Length 194 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40Q8IXQ3 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
C9orf40Q8IXQ3 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC17.69■□□□□ 0.42
C9orf40Q8IXQ3 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
C9orf40Q8IXQ3 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
C9orf40Q8IXQ3 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC17.69■□□□□ 0.42
C9orf40Q8IXQ3 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
C9orf40Q8IXQ3 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
C9orf40Q8IXQ3 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
C9orf40Q8IXQ3 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC17.69■□□□□ 0.42
C9orf40Q8IXQ3 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
C9orf40Q8IXQ3 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC17.69■□□□□ 0.42
C9orf40Q8IXQ3 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC17.69■□□□□ 0.42
C9orf40Q8IXQ3 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
C9orf40Q8IXQ3 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC17.69■□□□□ 0.42
C9orf40Q8IXQ3 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC17.69■□□□□ 0.42
C9orf40Q8IXQ3 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
C9orf40Q8IXQ3 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC17.69■□□□□ 0.42
C9orf40Q8IXQ3 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC17.69■□□□□ 0.42
C9orf40Q8IXQ3 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC17.69■□□□□ 0.42
C9orf40Q8IXQ3 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC17.69■□□□□ 0.42
C9orf40Q8IXQ3 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC17.69■□□□□ 0.42
C9orf40Q8IXQ3 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC17.69■□□□□ 0.42
C9orf40Q8IXQ3 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
C9orf40Q8IXQ3 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
C9orf40Q8IXQ3 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC17.69■□□□□ 0.42
C9orf40Q8IXQ3 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC17.69■□□□□ 0.42
C9orf40Q8IXQ3 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
C9orf40Q8IXQ3 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
C9orf40Q8IXQ3 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
C9orf40Q8IXQ3 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
C9orf40Q8IXQ3 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC17.68■□□□□ 0.42
C9orf40Q8IXQ3 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC17.68■□□□□ 0.42
C9orf40Q8IXQ3 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
C9orf40Q8IXQ3 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
C9orf40Q8IXQ3 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
C9orf40Q8IXQ3 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
C9orf40Q8IXQ3 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC17.68■□□□□ 0.42
C9orf40Q8IXQ3 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
C9orf40Q8IXQ3 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC17.68■□□□□ 0.42
C9orf40Q8IXQ3 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC17.68■□□□□ 0.42
C9orf40Q8IXQ3 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC17.68■□□□□ 0.42
C9orf40Q8IXQ3 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC17.68■□□□□ 0.42
C9orf40Q8IXQ3 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC17.68■□□□□ 0.42
C9orf40Q8IXQ3 AC010947.1-201ENST00000623454 693 ntBASIC17.68■□□□□ 0.42
C9orf40Q8IXQ3 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC17.68■□□□□ 0.42
C9orf40Q8IXQ3 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
C9orf40Q8IXQ3 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC17.68■□□□□ 0.42
C9orf40Q8IXQ3 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
C9orf40Q8IXQ3 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC17.67■□□□□ 0.42
C9orf40Q8IXQ3 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
C9orf40Q8IXQ3 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC17.67■□□□□ 0.42
C9orf40Q8IXQ3 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
C9orf40Q8IXQ3 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
C9orf40Q8IXQ3 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC17.67■□□□□ 0.42
C9orf40Q8IXQ3 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC17.67■□□□□ 0.42
C9orf40Q8IXQ3 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
C9orf40Q8IXQ3 NAPSB-206ENST00000562112 1266 ntBASIC17.67■□□□□ 0.42
C9orf40Q8IXQ3 ARL16-209ENST00000573715 763 ntTSL 3 BASIC17.67■□□□□ 0.42
C9orf40Q8IXQ3 ARL16-211ENST00000576135 694 ntTSL 3 BASIC17.67■□□□□ 0.42
C9orf40Q8IXQ3 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC17.67■□□□□ 0.42
C9orf40Q8IXQ3 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
C9orf40Q8IXQ3 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
C9orf40Q8IXQ3 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
C9orf40Q8IXQ3 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC17.67■□□□□ 0.42
C9orf40Q8IXQ3 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
C9orf40Q8IXQ3 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC17.67■□□□□ 0.42
C9orf40Q8IXQ3 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC17.67■□□□□ 0.42
C9orf40Q8IXQ3 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
C9orf40Q8IXQ3 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
C9orf40Q8IXQ3 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
C9orf40Q8IXQ3 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
C9orf40Q8IXQ3 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
C9orf40Q8IXQ3 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
C9orf40Q8IXQ3 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC17.66■□□□□ 0.42
C9orf40Q8IXQ3 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
C9orf40Q8IXQ3 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
C9orf40Q8IXQ3 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
C9orf40Q8IXQ3 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC17.66■□□□□ 0.42
C9orf40Q8IXQ3 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC17.66■□□□□ 0.42
C9orf40Q8IXQ3 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
C9orf40Q8IXQ3 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
C9orf40Q8IXQ3 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
C9orf40Q8IXQ3 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
C9orf40Q8IXQ3 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
C9orf40Q8IXQ3 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
C9orf40Q8IXQ3 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
C9orf40Q8IXQ3 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC17.66■□□□□ 0.42
C9orf40Q8IXQ3 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC17.66■□□□□ 0.42
C9orf40Q8IXQ3 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC17.66■□□□□ 0.42
C9orf40Q8IXQ3 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
C9orf40Q8IXQ3 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
C9orf40Q8IXQ3 AC133561.5-201ENST00000635547 218 ntBASIC17.66■□□□□ 0.42
C9orf40Q8IXQ3 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
C9orf40Q8IXQ3 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC17.66■□□□□ 0.42
C9orf40Q8IXQ3 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC17.66■□□□□ 0.42
C9orf40Q8IXQ3 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
C9orf40Q8IXQ3 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
C9orf40Q8IXQ3 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
C9orf40Q8IXQ3 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
C9orf40Q8IXQ3 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC17.66■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms