Protein–RNA interactions for Protein: Q8IVW4

CDKL3, Cyclin-dependent kinase-like 3, humanhuman

Predicted RBP Predictions only

Length 592 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL3Q8IVW4 USP39-202ENST00000409025 1946 ntTSL 5 BASIC19.68■□□□□ 0.74
CDKL3Q8IVW4 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
CDKL3Q8IVW4 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CDKL3Q8IVW4 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
CDKL3Q8IVW4 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CDKL3Q8IVW4 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CDKL3Q8IVW4 FEM1AP3-201ENST00000403722 1741 ntBASIC19.68■□□□□ 0.74
CDKL3Q8IVW4 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
CDKL3Q8IVW4 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CDKL3Q8IVW4 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CDKL3Q8IVW4 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CDKL3Q8IVW4 CROCCP3-202ENST00000420820 1947 ntBASIC19.67■□□□□ 0.74
CDKL3Q8IVW4 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
CDKL3Q8IVW4 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CDKL3Q8IVW4 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC19.67■□□□□ 0.74
CDKL3Q8IVW4 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CDKL3Q8IVW4 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
CDKL3Q8IVW4 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CDKL3Q8IVW4 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CDKL3Q8IVW4 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CDKL3Q8IVW4 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC19.67■□□□□ 0.74
CDKL3Q8IVW4 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CDKL3Q8IVW4 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CDKL3Q8IVW4 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CDKL3Q8IVW4 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
CDKL3Q8IVW4 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CDKL3Q8IVW4 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
CDKL3Q8IVW4 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC19.67■□□□□ 0.74
CDKL3Q8IVW4 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC19.67■□□□□ 0.74
CDKL3Q8IVW4 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC19.67■□□□□ 0.74
CDKL3Q8IVW4 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CDKL3Q8IVW4 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC19.67■□□□□ 0.74
CDKL3Q8IVW4 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
CDKL3Q8IVW4 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC19.66■□□□□ 0.74
CDKL3Q8IVW4 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC19.66■□□□□ 0.74
CDKL3Q8IVW4 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC19.66■□□□□ 0.74
CDKL3Q8IVW4 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
CDKL3Q8IVW4 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC19.66■□□□□ 0.74
CDKL3Q8IVW4 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CDKL3Q8IVW4 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC19.66■□□□□ 0.74
CDKL3Q8IVW4 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC19.66■□□□□ 0.74
CDKL3Q8IVW4 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC19.66■□□□□ 0.74
CDKL3Q8IVW4 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CDKL3Q8IVW4 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CDKL3Q8IVW4 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CDKL3Q8IVW4 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
CDKL3Q8IVW4 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
CDKL3Q8IVW4 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CDKL3Q8IVW4 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
CDKL3Q8IVW4 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CDKL3Q8IVW4 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC19.66■□□□□ 0.74
CDKL3Q8IVW4 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC19.66■□□□□ 0.74
CDKL3Q8IVW4 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC19.66■□□□□ 0.74
CDKL3Q8IVW4 KRT16P5-201ENST00000455284 522 ntBASIC19.66■□□□□ 0.74
CDKL3Q8IVW4 LY6E-205ENST00000519611 635 ntTSL 3 BASIC19.66■□□□□ 0.74
CDKL3Q8IVW4 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC19.66■□□□□ 0.74
CDKL3Q8IVW4 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC19.66■□□□□ 0.74
CDKL3Q8IVW4 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC19.66■□□□□ 0.74
CDKL3Q8IVW4 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC19.66■□□□□ 0.74
CDKL3Q8IVW4 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
CDKL3Q8IVW4 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
CDKL3Q8IVW4 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CDKL3Q8IVW4 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CDKL3Q8IVW4 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CDKL3Q8IVW4 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
CDKL3Q8IVW4 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CDKL3Q8IVW4 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
CDKL3Q8IVW4 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CDKL3Q8IVW4 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC19.65■□□□□ 0.74
CDKL3Q8IVW4 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC19.65■□□□□ 0.74
CDKL3Q8IVW4 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC19.65■□□□□ 0.74
CDKL3Q8IVW4 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CDKL3Q8IVW4 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
CDKL3Q8IVW4 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC19.65■□□□□ 0.74
CDKL3Q8IVW4 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC19.65■□□□□ 0.74
CDKL3Q8IVW4 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
CDKL3Q8IVW4 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CDKL3Q8IVW4 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC19.65■□□□□ 0.74
CDKL3Q8IVW4 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.65■□□□□ 0.74
CDKL3Q8IVW4 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CDKL3Q8IVW4 SERF2-207ENST00000409614 582 ntTSL 2 BASIC19.65■□□□□ 0.74
CDKL3Q8IVW4 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
CDKL3Q8IVW4 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.65■□□□□ 0.74
CDKL3Q8IVW4 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.65■□□□□ 0.74
CDKL3Q8IVW4 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CDKL3Q8IVW4 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CDKL3Q8IVW4 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC19.65■□□□□ 0.74
CDKL3Q8IVW4 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
CDKL3Q8IVW4 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC19.65■□□□□ 0.74
CDKL3Q8IVW4 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC19.65■□□□□ 0.74
CDKL3Q8IVW4 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CDKL3Q8IVW4 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
CDKL3Q8IVW4 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC19.65■□□□□ 0.74
CDKL3Q8IVW4 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
CDKL3Q8IVW4 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CDKL3Q8IVW4 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC19.65■□□□□ 0.74
CDKL3Q8IVW4 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
CDKL3Q8IVW4 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC19.64■□□□□ 0.74
CDKL3Q8IVW4 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
CDKL3Q8IVW4 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 18.7 ms