Protein–RNA interactions for Protein: Q8IV32

CCDC71, Coiled-coil domain-containing protein 71, humanhuman

Predicted RBP Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71Q8IV32 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
CCDC71Q8IV32 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CCDC71Q8IV32 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC17.95■□□□□ 0.46
CCDC71Q8IV32 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CCDC71Q8IV32 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
CCDC71Q8IV32 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CCDC71Q8IV32 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
CCDC71Q8IV32 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC17.95■□□□□ 0.46
CCDC71Q8IV32 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC17.95■□□□□ 0.46
CCDC71Q8IV32 AL161938.1-201ENST00000569833 2180 ntBASIC17.94■□□□□ 0.46
CCDC71Q8IV32 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CCDC71Q8IV32 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CCDC71Q8IV32 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CCDC71Q8IV32 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
CCDC71Q8IV32 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC17.94■□□□□ 0.46
CCDC71Q8IV32 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
CCDC71Q8IV32 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC17.94■□□□□ 0.46
CCDC71Q8IV32 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CCDC71Q8IV32 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CCDC71Q8IV32 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CCDC71Q8IV32 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
CCDC71Q8IV32 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC17.94■□□□□ 0.46
CCDC71Q8IV32 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC17.94■□□□□ 0.46
CCDC71Q8IV32 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
CCDC71Q8IV32 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CCDC71Q8IV32 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC17.94■□□□□ 0.46
CCDC71Q8IV32 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC17.94■□□□□ 0.46
CCDC71Q8IV32 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC17.94■□□□□ 0.46
CCDC71Q8IV32 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC17.94■□□□□ 0.46
CCDC71Q8IV32 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CCDC71Q8IV32 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC17.94■□□□□ 0.46
CCDC71Q8IV32 AL049637.2-201ENST00000641778 930 ntBASIC17.94■□□□□ 0.46
CCDC71Q8IV32 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CCDC71Q8IV32 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
CCDC71Q8IV32 KRT8P17-201ENST00000453110 1448 ntBASIC17.94■□□□□ 0.46
CCDC71Q8IV32 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC17.94■□□□□ 0.46
CCDC71Q8IV32 AP001271.2-201ENST00000624018 1556 ntBASIC17.94■□□□□ 0.46
CCDC71Q8IV32 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
CCDC71Q8IV32 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CCDC71Q8IV32 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CCDC71Q8IV32 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CCDC71Q8IV32 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CCDC71Q8IV32 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CCDC71Q8IV32 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC17.94■□□□□ 0.46
CCDC71Q8IV32 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
CCDC71Q8IV32 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
CCDC71Q8IV32 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC17.94■□□□□ 0.46
CCDC71Q8IV32 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CCDC71Q8IV32 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CCDC71Q8IV32 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
CCDC71Q8IV32 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CCDC71Q8IV32 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
CCDC71Q8IV32 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC17.93■□□□□ 0.46
CCDC71Q8IV32 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CCDC71Q8IV32 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CCDC71Q8IV32 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CCDC71Q8IV32 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC17.93■□□□□ 0.46
CCDC71Q8IV32 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC17.93■□□□□ 0.46
CCDC71Q8IV32 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
CCDC71Q8IV32 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
CCDC71Q8IV32 KRT17P2-201ENST00000300992 1314 ntBASIC17.93■□□□□ 0.46
CCDC71Q8IV32 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC17.93■□□□□ 0.46
CCDC71Q8IV32 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
CCDC71Q8IV32 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC17.93■□□□□ 0.46
CCDC71Q8IV32 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CCDC71Q8IV32 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
CCDC71Q8IV32 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
CCDC71Q8IV32 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CCDC71Q8IV32 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC17.92■□□□□ 0.46
CCDC71Q8IV32 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC17.92■□□□□ 0.46
CCDC71Q8IV32 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CCDC71Q8IV32 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CCDC71Q8IV32 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CCDC71Q8IV32 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CCDC71Q8IV32 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CCDC71Q8IV32 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CCDC71Q8IV32 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC17.92■□□□□ 0.46
CCDC71Q8IV32 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC17.92■□□□□ 0.46
CCDC71Q8IV32 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC17.92■□□□□ 0.46
CCDC71Q8IV32 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC17.92■□□□□ 0.46
CCDC71Q8IV32 BX088651.1-201ENST00000540551 451 ntBASIC17.92■□□□□ 0.46
CCDC71Q8IV32 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC17.92■□□□□ 0.46
CCDC71Q8IV32 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC17.92■□□□□ 0.46
CCDC71Q8IV32 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC17.92■□□□□ 0.46
CCDC71Q8IV32 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC17.92■□□□□ 0.46
CCDC71Q8IV32 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC17.92■□□□□ 0.46
CCDC71Q8IV32 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
CCDC71Q8IV32 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC17.92■□□□□ 0.46
CCDC71Q8IV32 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
CCDC71Q8IV32 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CCDC71Q8IV32 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC17.92■□□□□ 0.46
CCDC71Q8IV32 AC006333.2-201ENST00000607957 2099 ntBASIC17.92■□□□□ 0.46
CCDC71Q8IV32 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CCDC71Q8IV32 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CCDC71Q8IV32 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CCDC71Q8IV32 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CCDC71Q8IV32 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CCDC71Q8IV32 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
CCDC71Q8IV32 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
CCDC71Q8IV32 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms