Protein–RNA interactions for Protein: Q86YS3

RAB11FIP4, Rab11 family-interacting protein 4, humanhuman

Predictions only

Length 637 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP4Q86YS3 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC22.48■■□□□ 1.19
RAB11FIP4Q86YS3 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC22.48■■□□□ 1.19
RAB11FIP4Q86YS3 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC22.48■■□□□ 1.19
RAB11FIP4Q86YS3 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC22.48■■□□□ 1.19
RAB11FIP4Q86YS3 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC22.48■■□□□ 1.19
RAB11FIP4Q86YS3 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
RAB11FIP4Q86YS3 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC22.48■■□□□ 1.19
RAB11FIP4Q86YS3 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC22.48■■□□□ 1.19
RAB11FIP4Q86YS3 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC22.48■■□□□ 1.19
RAB11FIP4Q86YS3 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC22.48■■□□□ 1.19
RAB11FIP4Q86YS3 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC22.47■■□□□ 1.19
RAB11FIP4Q86YS3 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
RAB11FIP4Q86YS3 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
RAB11FIP4Q86YS3 AC098818.2-201ENST00000564925 2320 ntBASIC22.47■■□□□ 1.19
RAB11FIP4Q86YS3 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC22.47■■□□□ 1.19
RAB11FIP4Q86YS3 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC22.47■■□□□ 1.19
RAB11FIP4Q86YS3 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC22.47■■□□□ 1.19
RAB11FIP4Q86YS3 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC22.47■■□□□ 1.19
RAB11FIP4Q86YS3 AC012618.2-201ENST00000428058 849 ntBASIC22.47■■□□□ 1.19
RAB11FIP4Q86YS3 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
RAB11FIP4Q86YS3 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC22.47■■□□□ 1.19
RAB11FIP4Q86YS3 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
RAB11FIP4Q86YS3 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC22.47■■□□□ 1.19
RAB11FIP4Q86YS3 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC22.47■■□□□ 1.19
RAB11FIP4Q86YS3 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC22.47■■□□□ 1.19
RAB11FIP4Q86YS3 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
RAB11FIP4Q86YS3 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC22.47■■□□□ 1.19
RAB11FIP4Q86YS3 AP000974.1-201ENST00000623909 2387 ntBASIC22.47■■□□□ 1.19
RAB11FIP4Q86YS3 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC22.47■■□□□ 1.19
RAB11FIP4Q86YS3 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC22.46■■□□□ 1.19
RAB11FIP4Q86YS3 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
RAB11FIP4Q86YS3 AL161938.1-201ENST00000569833 2180 ntBASIC22.46■■□□□ 1.19
RAB11FIP4Q86YS3 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC22.46■■□□□ 1.19
RAB11FIP4Q86YS3 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
RAB11FIP4Q86YS3 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC22.46■■□□□ 1.19
RAB11FIP4Q86YS3 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
RAB11FIP4Q86YS3 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC22.46■■□□□ 1.19
RAB11FIP4Q86YS3 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC22.46■■□□□ 1.19
RAB11FIP4Q86YS3 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC22.46■■□□□ 1.19
RAB11FIP4Q86YS3 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC22.46■■□□□ 1.19
RAB11FIP4Q86YS3 AC131212.4-201ENST00000623606 975 ntBASIC22.46■■□□□ 1.19
RAB11FIP4Q86YS3 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
RAB11FIP4Q86YS3 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
RAB11FIP4Q86YS3 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC22.46■■□□□ 1.19
RAB11FIP4Q86YS3 SRI-203ENST00000419179 1307 ntTSL 2 BASIC22.46■■□□□ 1.19
RAB11FIP4Q86YS3 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC22.46■■□□□ 1.19
RAB11FIP4Q86YS3 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC22.46■■□□□ 1.19
RAB11FIP4Q86YS3 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
RAB11FIP4Q86YS3 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
RAB11FIP4Q86YS3 RCC2P6-201ENST00000526625 1557 ntBASIC22.46■■□□□ 1.19
RAB11FIP4Q86YS3 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
RAB11FIP4Q86YS3 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC22.45■■□□□ 1.19
RAB11FIP4Q86YS3 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC22.45■■□□□ 1.19
RAB11FIP4Q86YS3 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC22.45■■□□□ 1.19
RAB11FIP4Q86YS3 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
RAB11FIP4Q86YS3 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC22.45■■□□□ 1.18
RAB11FIP4Q86YS3 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC22.45■■□□□ 1.18
RAB11FIP4Q86YS3 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC22.45■■□□□ 1.18
RAB11FIP4Q86YS3 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
RAB11FIP4Q86YS3 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
RAB11FIP4Q86YS3 MESTP1-201ENST00000404287 994 ntBASIC22.45■■□□□ 1.18
RAB11FIP4Q86YS3 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC22.45■■□□□ 1.18
RAB11FIP4Q86YS3 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC22.45■■□□□ 1.18
RAB11FIP4Q86YS3 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC22.45■■□□□ 1.18
RAB11FIP4Q86YS3 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC22.45■■□□□ 1.18
RAB11FIP4Q86YS3 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC22.45■■□□□ 1.18
RAB11FIP4Q86YS3 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC22.45■■□□□ 1.18
RAB11FIP4Q86YS3 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
RAB11FIP4Q86YS3 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC22.45■■□□□ 1.18
RAB11FIP4Q86YS3 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
RAB11FIP4Q86YS3 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
RAB11FIP4Q86YS3 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC22.45■■□□□ 1.18
RAB11FIP4Q86YS3 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC22.45■■□□□ 1.18
RAB11FIP4Q86YS3 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
RAB11FIP4Q86YS3 AC141586.3-201ENST00000562166 1838 ntBASIC22.45■■□□□ 1.18
RAB11FIP4Q86YS3 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
RAB11FIP4Q86YS3 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
RAB11FIP4Q86YS3 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC22.44■■□□□ 1.18
RAB11FIP4Q86YS3 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
RAB11FIP4Q86YS3 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC22.44■■□□□ 1.18
RAB11FIP4Q86YS3 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC22.44■■□□□ 1.18
RAB11FIP4Q86YS3 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
RAB11FIP4Q86YS3 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC22.44■■□□□ 1.18
RAB11FIP4Q86YS3 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC22.44■■□□□ 1.18
RAB11FIP4Q86YS3 TSPY15P-201ENST00000457163 923 ntBASIC22.44■■□□□ 1.18
RAB11FIP4Q86YS3 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC22.44■■□□□ 1.18
RAB11FIP4Q86YS3 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
RAB11FIP4Q86YS3 AC091390.4-202ENST00000476426 537 ntBASIC22.44■■□□□ 1.18
RAB11FIP4Q86YS3 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC22.44■■□□□ 1.18
RAB11FIP4Q86YS3 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC22.44■■□□□ 1.18
RAB11FIP4Q86YS3 AL135905.2-201ENST00000584934 1404 ntBASIC22.44■■□□□ 1.18
RAB11FIP4Q86YS3 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC22.44■■□□□ 1.18
RAB11FIP4Q86YS3 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC22.44■■□□□ 1.18
RAB11FIP4Q86YS3 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC22.44■■□□□ 1.18
RAB11FIP4Q86YS3 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC22.43■■□□□ 1.18
RAB11FIP4Q86YS3 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
RAB11FIP4Q86YS3 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
RAB11FIP4Q86YS3 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC22.43■■□□□ 1.18
RAB11FIP4Q86YS3 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
RAB11FIP4Q86YS3 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC22.43■■□□□ 1.18
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms