Protein–RNA interactions for Protein: Q6ZV60

LINC00173, Putative uncharacterized protein encoded by LINC00173, humanhuman

Predictions only

Length 143 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00173Q6ZV60 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
LINC00173Q6ZV60 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC13.88□□□□□ -0.19
LINC00173Q6ZV60 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
LINC00173Q6ZV60 AC046158.3-201ENST00000624947 2558 ntBASIC13.88□□□□□ -0.19
LINC00173Q6ZV60 AC135776.1-201ENST00000319817 2481 ntBASIC13.88□□□□□ -0.19
LINC00173Q6ZV60 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
LINC00173Q6ZV60 AC018695.7-201ENST00000624587 2492 ntBASIC13.88□□□□□ -0.19
LINC00173Q6ZV60 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC13.88□□□□□ -0.19
LINC00173Q6ZV60 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
LINC00173Q6ZV60 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
LINC00173Q6ZV60 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC13.88□□□□□ -0.19
LINC00173Q6ZV60 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
LINC00173Q6ZV60 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
LINC00173Q6ZV60 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
LINC00173Q6ZV60 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC13.88□□□□□ -0.19
LINC00173Q6ZV60 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
LINC00173Q6ZV60 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
LINC00173Q6ZV60 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC13.88□□□□□ -0.19
LINC00173Q6ZV60 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
LINC00173Q6ZV60 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC13.88□□□□□ -0.19
LINC00173Q6ZV60 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
LINC00173Q6ZV60 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
LINC00173Q6ZV60 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
LINC00173Q6ZV60 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC13.88□□□□□ -0.19
LINC00173Q6ZV60 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
LINC00173Q6ZV60 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
LINC00173Q6ZV60 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
LINC00173Q6ZV60 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC13.88□□□□□ -0.19
LINC00173Q6ZV60 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
LINC00173Q6ZV60 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
LINC00173Q6ZV60 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
LINC00173Q6ZV60 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
LINC00173Q6ZV60 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
LINC00173Q6ZV60 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC13.88□□□□□ -0.19
LINC00173Q6ZV60 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC13.88□□□□□ -0.19
LINC00173Q6ZV60 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
LINC00173Q6ZV60 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
LINC00173Q6ZV60 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC13.88□□□□□ -0.19
LINC00173Q6ZV60 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
LINC00173Q6ZV60 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC13.87□□□□□ -0.19
LINC00173Q6ZV60 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC13.87□□□□□ -0.19
LINC00173Q6ZV60 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
LINC00173Q6ZV60 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
LINC00173Q6ZV60 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
LINC00173Q6ZV60 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC13.87□□□□□ -0.19
LINC00173Q6ZV60 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC13.87□□□□□ -0.19
LINC00173Q6ZV60 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC13.87□□□□□ -0.19
LINC00173Q6ZV60 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC13.87□□□□□ -0.19
LINC00173Q6ZV60 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC13.87□□□□□ -0.19
LINC00173Q6ZV60 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC13.87□□□□□ -0.19
LINC00173Q6ZV60 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
LINC00173Q6ZV60 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
LINC00173Q6ZV60 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
LINC00173Q6ZV60 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
LINC00173Q6ZV60 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
LINC00173Q6ZV60 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
LINC00173Q6ZV60 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
LINC00173Q6ZV60 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
LINC00173Q6ZV60 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
LINC00173Q6ZV60 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
LINC00173Q6ZV60 AP001271.2-201ENST00000624018 1556 ntBASIC13.87□□□□□ -0.19
LINC00173Q6ZV60 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC13.87□□□□□ -0.19
LINC00173Q6ZV60 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
LINC00173Q6ZV60 TSPY26P-201ENST00000476365 1326 ntBASIC13.87□□□□□ -0.19
LINC00173Q6ZV60 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
LINC00173Q6ZV60 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
LINC00173Q6ZV60 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC13.87□□□□□ -0.19
LINC00173Q6ZV60 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
LINC00173Q6ZV60 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
LINC00173Q6ZV60 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC13.87□□□□□ -0.19
LINC00173Q6ZV60 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC13.87□□□□□ -0.19
LINC00173Q6ZV60 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
LINC00173Q6ZV60 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC13.86□□□□□ -0.19
LINC00173Q6ZV60 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
LINC00173Q6ZV60 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
LINC00173Q6ZV60 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
LINC00173Q6ZV60 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
LINC00173Q6ZV60 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
LINC00173Q6ZV60 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
LINC00173Q6ZV60 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC13.86□□□□□ -0.19
LINC00173Q6ZV60 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC13.86□□□□□ -0.19
LINC00173Q6ZV60 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
LINC00173Q6ZV60 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
LINC00173Q6ZV60 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC13.86□□□□□ -0.19
LINC00173Q6ZV60 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
LINC00173Q6ZV60 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
LINC00173Q6ZV60 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
LINC00173Q6ZV60 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
LINC00173Q6ZV60 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
LINC00173Q6ZV60 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC13.86□□□□□ -0.19
LINC00173Q6ZV60 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
LINC00173Q6ZV60 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC13.86□□□□□ -0.19
LINC00173Q6ZV60 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC13.86□□□□□ -0.19
LINC00173Q6ZV60 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
LINC00173Q6ZV60 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC13.86□□□□□ -0.19
LINC00173Q6ZV60 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
LINC00173Q6ZV60 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC13.86□□□□□ -0.19
LINC00173Q6ZV60 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
LINC00173Q6ZV60 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
LINC00173Q6ZV60 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms