Protein–RNA interactions for Protein: Q6STE5

SMARCD3, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3, humanhuman

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3Q6STE5 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
SMARCD3Q6STE5 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
SMARCD3Q6STE5 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
SMARCD3Q6STE5 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC17.46■□□□□ 0.39
SMARCD3Q6STE5 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SMARCD3Q6STE5 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC17.46■□□□□ 0.39
SMARCD3Q6STE5 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC17.46■□□□□ 0.39
SMARCD3Q6STE5 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
SMARCD3Q6STE5 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
SMARCD3Q6STE5 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
SMARCD3Q6STE5 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SMARCD3Q6STE5 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
SMARCD3Q6STE5 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
SMARCD3Q6STE5 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
SMARCD3Q6STE5 GATS-209ENST00000454084 1030 ntTSL 3 BASIC17.46■□□□□ 0.39
SMARCD3Q6STE5 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
SMARCD3Q6STE5 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC17.46■□□□□ 0.39
SMARCD3Q6STE5 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC17.46■□□□□ 0.39
SMARCD3Q6STE5 MIR4758-201ENST00000577688 71 ntBASIC17.46■□□□□ 0.39
SMARCD3Q6STE5 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC17.46■□□□□ 0.39
SMARCD3Q6STE5 HLA-B-256ENST00000639848 1089 ntBASIC17.46■□□□□ 0.39
SMARCD3Q6STE5 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SMARCD3Q6STE5 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
SMARCD3Q6STE5 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
SMARCD3Q6STE5 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
SMARCD3Q6STE5 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
SMARCD3Q6STE5 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
SMARCD3Q6STE5 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC17.46■□□□□ 0.39
SMARCD3Q6STE5 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
SMARCD3Q6STE5 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC17.46■□□□□ 0.38
SMARCD3Q6STE5 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
SMARCD3Q6STE5 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC17.45■□□□□ 0.38
SMARCD3Q6STE5 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SMARCD3Q6STE5 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SMARCD3Q6STE5 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC17.45■□□□□ 0.38
SMARCD3Q6STE5 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SMARCD3Q6STE5 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC17.45■□□□□ 0.38
SMARCD3Q6STE5 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
SMARCD3Q6STE5 SDHAP1-207ENST00000440850 2000 ntBASIC17.45■□□□□ 0.38
SMARCD3Q6STE5 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
SMARCD3Q6STE5 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
SMARCD3Q6STE5 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
SMARCD3Q6STE5 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SMARCD3Q6STE5 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SMARCD3Q6STE5 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SMARCD3Q6STE5 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SMARCD3Q6STE5 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SMARCD3Q6STE5 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SMARCD3Q6STE5 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
SMARCD3Q6STE5 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC17.45■□□□□ 0.38
SMARCD3Q6STE5 RHEB-204ENST00000472642 900 ntTSL 3 BASIC17.45■□□□□ 0.38
SMARCD3Q6STE5 AC097658.1-201ENST00000475555 843 ntBASIC17.45■□□□□ 0.38
SMARCD3Q6STE5 REXO2-208ENST00000539754 791 ntTSL 2 BASIC17.45■□□□□ 0.38
SMARCD3Q6STE5 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC17.45■□□□□ 0.38
SMARCD3Q6STE5 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC17.45■□□□□ 0.38
SMARCD3Q6STE5 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC17.45■□□□□ 0.38
SMARCD3Q6STE5 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC17.45■□□□□ 0.38
SMARCD3Q6STE5 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SMARCD3Q6STE5 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
SMARCD3Q6STE5 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SMARCD3Q6STE5 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
SMARCD3Q6STE5 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
SMARCD3Q6STE5 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
SMARCD3Q6STE5 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SMARCD3Q6STE5 AC026471.1-201ENST00000564629 3026 ntBASIC17.45■□□□□ 0.38
SMARCD3Q6STE5 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
SMARCD3Q6STE5 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SMARCD3Q6STE5 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
SMARCD3Q6STE5 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC17.44■□□□□ 0.38
SMARCD3Q6STE5 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
SMARCD3Q6STE5 ADK-206ENST00000541550 2222 ntTSL 2 BASIC17.44■□□□□ 0.38
SMARCD3Q6STE5 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC17.44■□□□□ 0.38
SMARCD3Q6STE5 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SMARCD3Q6STE5 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
SMARCD3Q6STE5 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
SMARCD3Q6STE5 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC17.44■□□□□ 0.38
SMARCD3Q6STE5 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
SMARCD3Q6STE5 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
SMARCD3Q6STE5 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
SMARCD3Q6STE5 PPP1R14BP2-201ENST00000426284 444 ntBASIC17.44■□□□□ 0.38
SMARCD3Q6STE5 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC17.44■□□□□ 0.38
SMARCD3Q6STE5 GUSBP6-202ENST00000438529 1198 ntBASIC17.44■□□□□ 0.38
SMARCD3Q6STE5 ABHD17AP6-201ENST00000458502 1044 ntBASIC17.44■□□□□ 0.38
SMARCD3Q6STE5 PPP1R14BP3-201ENST00000509033 445 ntBASIC17.44■□□□□ 0.38
SMARCD3Q6STE5 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC17.44■□□□□ 0.38
SMARCD3Q6STE5 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC17.44■□□□□ 0.38
SMARCD3Q6STE5 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SMARCD3Q6STE5 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SMARCD3Q6STE5 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SMARCD3Q6STE5 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
SMARCD3Q6STE5 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SMARCD3Q6STE5 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
SMARCD3Q6STE5 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SMARCD3Q6STE5 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC17.44■□□□□ 0.38
SMARCD3Q6STE5 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC17.43■□□□□ 0.38
SMARCD3Q6STE5 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC17.43■□□□□ 0.38
SMARCD3Q6STE5 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SMARCD3Q6STE5 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SMARCD3Q6STE5 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
SMARCD3Q6STE5 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC17.43■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 49.4 ms