Protein–RNA interactions for Protein: Q6PI97

C11orf88, UPF0722 protein C11orf88, humanhuman

Predictions only

Length 169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88Q6PI97 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC16.65■□□□□ 0.26
C11orf88Q6PI97 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
C11orf88Q6PI97 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
C11orf88Q6PI97 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
C11orf88Q6PI97 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
C11orf88Q6PI97 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
C11orf88Q6PI97 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
C11orf88Q6PI97 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
C11orf88Q6PI97 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC16.65■□□□□ 0.26
C11orf88Q6PI97 CNN2P6-201ENST00000439038 900 ntBASIC16.65■□□□□ 0.26
C11orf88Q6PI97 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC16.65■□□□□ 0.26
C11orf88Q6PI97 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
C11orf88Q6PI97 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
C11orf88Q6PI97 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
C11orf88Q6PI97 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC16.65■□□□□ 0.26
C11orf88Q6PI97 AC069236.1-201ENST00000604339 616 ntBASIC16.65■□□□□ 0.26
C11orf88Q6PI97 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
C11orf88Q6PI97 OR10C1-204ENST00000622521 1039 ntBASIC16.65■□□□□ 0.26
C11orf88Q6PI97 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
C11orf88Q6PI97 GOLGA2P11-201ENST00000562660 1621 ntBASIC16.65■□□□□ 0.26
C11orf88Q6PI97 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
C11orf88Q6PI97 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC16.65■□□□□ 0.26
C11orf88Q6PI97 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
C11orf88Q6PI97 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
C11orf88Q6PI97 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
C11orf88Q6PI97 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC16.65■□□□□ 0.26
C11orf88Q6PI97 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC16.65■□□□□ 0.26
C11orf88Q6PI97 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
C11orf88Q6PI97 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC16.65■□□□□ 0.26
C11orf88Q6PI97 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC16.65■□□□□ 0.26
C11orf88Q6PI97 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
C11orf88Q6PI97 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC16.64■□□□□ 0.26
C11orf88Q6PI97 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
C11orf88Q6PI97 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
C11orf88Q6PI97 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
C11orf88Q6PI97 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC16.64■□□□□ 0.25
C11orf88Q6PI97 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
C11orf88Q6PI97 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC16.64■□□□□ 0.25
C11orf88Q6PI97 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
C11orf88Q6PI97 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
C11orf88Q6PI97 AL138781.1-201ENST00000566567 1274 ntBASIC16.64■□□□□ 0.25
C11orf88Q6PI97 AL162412.1-201ENST00000567129 965 ntBASIC16.64■□□□□ 0.25
C11orf88Q6PI97 MIR4758-201ENST00000577688 71 ntBASIC16.64■□□□□ 0.25
C11orf88Q6PI97 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC16.64■□□□□ 0.25
C11orf88Q6PI97 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC16.64■□□□□ 0.25
C11orf88Q6PI97 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC16.64■□□□□ 0.25
C11orf88Q6PI97 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
C11orf88Q6PI97 COMP-202ENST00000425807 2292 ntTSL 2 BASIC16.64■□□□□ 0.25
C11orf88Q6PI97 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
C11orf88Q6PI97 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
C11orf88Q6PI97 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
C11orf88Q6PI97 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
C11orf88Q6PI97 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
C11orf88Q6PI97 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
C11orf88Q6PI97 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC16.64■□□□□ 0.25
C11orf88Q6PI97 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
C11orf88Q6PI97 PCDHB18P-201ENST00000524813 2368 ntBASIC16.64■□□□□ 0.25
C11orf88Q6PI97 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC16.64■□□□□ 0.25
C11orf88Q6PI97 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
C11orf88Q6PI97 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
C11orf88Q6PI97 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
C11orf88Q6PI97 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
C11orf88Q6PI97 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
C11orf88Q6PI97 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC16.63■□□□□ 0.25
C11orf88Q6PI97 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
C11orf88Q6PI97 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
C11orf88Q6PI97 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
C11orf88Q6PI97 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC16.63■□□□□ 0.25
C11orf88Q6PI97 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC16.63■□□□□ 0.25
C11orf88Q6PI97 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
C11orf88Q6PI97 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
C11orf88Q6PI97 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC16.63■□□□□ 0.25
C11orf88Q6PI97 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
C11orf88Q6PI97 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
C11orf88Q6PI97 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
C11orf88Q6PI97 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC16.63■□□□□ 0.25
C11orf88Q6PI97 APTR-203ENST00000430801 583 ntTSL 5 BASIC16.63■□□□□ 0.25
C11orf88Q6PI97 AC069152.1-201ENST00000438030 544 ntBASIC16.63■□□□□ 0.25
C11orf88Q6PI97 APTR-205ENST00000447009 902 ntTSL 2 BASIC16.63■□□□□ 0.25
C11orf88Q6PI97 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
C11orf88Q6PI97 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC16.63■□□□□ 0.25
C11orf88Q6PI97 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC16.63■□□□□ 0.25
C11orf88Q6PI97 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC16.63■□□□□ 0.25
C11orf88Q6PI97 AC105036.2-201ENST00000569468 176 ntBASIC16.63■□□□□ 0.25
C11orf88Q6PI97 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC16.63■□□□□ 0.25
C11orf88Q6PI97 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
C11orf88Q6PI97 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC16.63■□□□□ 0.25
C11orf88Q6PI97 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
C11orf88Q6PI97 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
C11orf88Q6PI97 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC16.63■□□□□ 0.25
C11orf88Q6PI97 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
C11orf88Q6PI97 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
C11orf88Q6PI97 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
C11orf88Q6PI97 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
C11orf88Q6PI97 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
C11orf88Q6PI97 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC16.63■□□□□ 0.25
C11orf88Q6PI97 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
C11orf88Q6PI97 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
C11orf88Q6PI97 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
C11orf88Q6PI97 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms