Protein–RNA interactions for Protein: Q6IN85

PPP4R3A, Serine/threonine-protein phosphatase 4 regulatory subunit 3A, humanhuman

Predictions only

Length 833 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3AQ6IN85 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
PPP4R3AQ6IN85 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
PPP4R3AQ6IN85 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC21.78■■□□□ 1.08
PPP4R3AQ6IN85 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
PPP4R3AQ6IN85 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
PPP4R3AQ6IN85 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC21.78■■□□□ 1.08
PPP4R3AQ6IN85 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
PPP4R3AQ6IN85 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
PPP4R3AQ6IN85 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
PPP4R3AQ6IN85 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC21.77■■□□□ 1.08
PPP4R3AQ6IN85 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
PPP4R3AQ6IN85 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
PPP4R3AQ6IN85 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC21.77■■□□□ 1.08
PPP4R3AQ6IN85 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
PPP4R3AQ6IN85 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
PPP4R3AQ6IN85 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
PPP4R3AQ6IN85 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
PPP4R3AQ6IN85 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC21.77■■□□□ 1.08
PPP4R3AQ6IN85 TEX21P-204ENST00000641479 1693 ntBASIC21.77■■□□□ 1.08
PPP4R3AQ6IN85 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
PPP4R3AQ6IN85 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.08
PPP4R3AQ6IN85 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC21.77■■□□□ 1.08
PPP4R3AQ6IN85 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
PPP4R3AQ6IN85 DGCR10-201ENST00000609839 495 ntBASIC21.77■■□□□ 1.08
PPP4R3AQ6IN85 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC21.77■■□□□ 1.08
PPP4R3AQ6IN85 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
PPP4R3AQ6IN85 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC21.77■■□□□ 1.08
PPP4R3AQ6IN85 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
PPP4R3AQ6IN85 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.08
PPP4R3AQ6IN85 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC21.77■■□□□ 1.08
PPP4R3AQ6IN85 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.08
PPP4R3AQ6IN85 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.08
PPP4R3AQ6IN85 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.07
PPP4R3AQ6IN85 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC21.77■■□□□ 1.07
PPP4R3AQ6IN85 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC21.76■■□□□ 1.07
PPP4R3AQ6IN85 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
PPP4R3AQ6IN85 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC21.76■■□□□ 1.07
PPP4R3AQ6IN85 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
PPP4R3AQ6IN85 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
PPP4R3AQ6IN85 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC21.76■■□□□ 1.07
PPP4R3AQ6IN85 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
PPP4R3AQ6IN85 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC21.76■■□□□ 1.07
PPP4R3AQ6IN85 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC21.76■■□□□ 1.07
PPP4R3AQ6IN85 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC21.76■■□□□ 1.07
PPP4R3AQ6IN85 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC21.76■■□□□ 1.07
PPP4R3AQ6IN85 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC21.76■■□□□ 1.07
PPP4R3AQ6IN85 AP000692.2-201ENST00000608391 879 ntBASIC21.76■■□□□ 1.07
PPP4R3AQ6IN85 SNX21-213ENST00000614929 587 ntTSL 5 BASIC21.76■■□□□ 1.07
PPP4R3AQ6IN85 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
PPP4R3AQ6IN85 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
PPP4R3AQ6IN85 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
PPP4R3AQ6IN85 AC141586.3-201ENST00000562166 1838 ntBASIC21.76■■□□□ 1.07
PPP4R3AQ6IN85 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC21.75■■□□□ 1.07
PPP4R3AQ6IN85 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
PPP4R3AQ6IN85 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
PPP4R3AQ6IN85 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
PPP4R3AQ6IN85 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
PPP4R3AQ6IN85 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
PPP4R3AQ6IN85 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
PPP4R3AQ6IN85 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
PPP4R3AQ6IN85 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC21.75■■□□□ 1.07
PPP4R3AQ6IN85 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
PPP4R3AQ6IN85 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
PPP4R3AQ6IN85 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC21.75■■□□□ 1.07
PPP4R3AQ6IN85 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC21.75■■□□□ 1.07
PPP4R3AQ6IN85 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC21.75■■□□□ 1.07
PPP4R3AQ6IN85 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
PPP4R3AQ6IN85 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC21.75■■□□□ 1.07
PPP4R3AQ6IN85 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
PPP4R3AQ6IN85 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC21.75■■□□□ 1.07
PPP4R3AQ6IN85 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
PPP4R3AQ6IN85 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
PPP4R3AQ6IN85 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
PPP4R3AQ6IN85 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
PPP4R3AQ6IN85 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
PPP4R3AQ6IN85 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
PPP4R3AQ6IN85 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC21.74■■□□□ 1.07
PPP4R3AQ6IN85 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
PPP4R3AQ6IN85 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC21.74■■□□□ 1.07
PPP4R3AQ6IN85 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
PPP4R3AQ6IN85 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
PPP4R3AQ6IN85 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
PPP4R3AQ6IN85 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC21.74■■□□□ 1.07
PPP4R3AQ6IN85 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
PPP4R3AQ6IN85 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
PPP4R3AQ6IN85 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC21.74■■□□□ 1.07
PPP4R3AQ6IN85 TSPY23P-201ENST00000440136 739 ntBASIC21.74■■□□□ 1.07
PPP4R3AQ6IN85 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC21.74■■□□□ 1.07
PPP4R3AQ6IN85 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC21.74■■□□□ 1.07
PPP4R3AQ6IN85 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC21.74■■□□□ 1.07
PPP4R3AQ6IN85 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC21.74■■□□□ 1.07
PPP4R3AQ6IN85 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
PPP4R3AQ6IN85 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
PPP4R3AQ6IN85 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
PPP4R3AQ6IN85 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
PPP4R3AQ6IN85 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
PPP4R3AQ6IN85 KRT8P11-201ENST00000409686 1436 ntBASIC21.73■■□□□ 1.07
PPP4R3AQ6IN85 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
PPP4R3AQ6IN85 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC21.73■■□□□ 1.07
PPP4R3AQ6IN85 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 51 ms