Protein–RNA interactions for Protein: Q63HN8

RNF213, E3 ubiquitin-protein ligase RNF213, humanhuman

Predictions only

Length 5,207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF213Q63HN8 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC10.25□□□□□ -0.77
RNF213Q63HN8 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
RNF213Q63HN8 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC10.25□□□□□ -0.77
RNF213Q63HN8 AL117328.2-201ENST00000624617 1940 ntBASIC10.25□□□□□ -0.77
RNF213Q63HN8 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
RNF213Q63HN8 FAM99A-202ENST00000538190 1989 ntBASIC10.24□□□□□ -0.77
RNF213Q63HN8 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
RNF213Q63HN8 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC10.24□□□□□ -0.77
RNF213Q63HN8 OARD1-208ENST00000469104 704 ntTSL 2 BASIC10.24□□□□□ -0.77
RNF213Q63HN8 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
RNF213Q63HN8 CFL1-202ENST00000524553 860 ntTSL 2 BASIC10.24□□□□□ -0.77
RNF213Q63HN8 AC090616.6-201ENST00000582640 721 ntBASIC10.24□□□□□ -0.77
RNF213Q63HN8 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC10.24□□□□□ -0.77
RNF213Q63HN8 AQP6-205ENST00000618286 829 ntTSL 5 BASIC10.24□□□□□ -0.77
RNF213Q63HN8 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC10.24□□□□□ -0.77
RNF213Q63HN8 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC10.24□□□□□ -0.77
RNF213Q63HN8 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
RNF213Q63HN8 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
RNF213Q63HN8 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
RNF213Q63HN8 AL391807.1-203ENST00000604392 2365 ntBASIC10.24□□□□□ -0.77
RNF213Q63HN8 BAALC-202ENST00000306391 243 ntTSL 5 BASIC10.24□□□□□ -0.77
RNF213Q63HN8 BAALC-204ENST00000330955 222 ntTSL 5 BASIC10.24□□□□□ -0.77
RNF213Q63HN8 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC10.24□□□□□ -0.77
RNF213Q63HN8 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
RNF213Q63HN8 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
RNF213Q63HN8 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC10.24□□□□□ -0.77
RNF213Q63HN8 AC002347.1-201ENST00000569543 541 ntBASIC10.24□□□□□ -0.77
RNF213Q63HN8 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC10.24□□□□□ -0.77
RNF213Q63HN8 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
RNF213Q63HN8 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
RNF213Q63HN8 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC10.24□□□□□ -0.77
RNF213Q63HN8 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC10.24□□□□□ -0.77
RNF213Q63HN8 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC10.24□□□□□ -0.77
RNF213Q63HN8 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC10.24□□□□□ -0.77
RNF213Q63HN8 NOP2-211ENST00000540228 668 ntTSL 2 BASIC10.24□□□□□ -0.77
RNF213Q63HN8 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
RNF213Q63HN8 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC10.24□□□□□ -0.77
RNF213Q63HN8 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC10.24□□□□□ -0.77
RNF213Q63HN8 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
RNF213Q63HN8 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
RNF213Q63HN8 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC10.23□□□□□ -0.77
RNF213Q63HN8 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
RNF213Q63HN8 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
RNF213Q63HN8 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC10.23□□□□□ -0.77
RNF213Q63HN8 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
RNF213Q63HN8 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC10.23□□□□□ -0.77
RNF213Q63HN8 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
RNF213Q63HN8 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC10.23□□□□□ -0.77
RNF213Q63HN8 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC10.23□□□□□ -0.77
RNF213Q63HN8 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC10.23□□□□□ -0.77
RNF213Q63HN8 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC10.23□□□□□ -0.77
RNF213Q63HN8 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC10.23□□□□□ -0.77
RNF213Q63HN8 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC10.23□□□□□ -0.77
RNF213Q63HN8 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC10.23□□□□□ -0.77
RNF213Q63HN8 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
RNF213Q63HN8 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
RNF213Q63HN8 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
RNF213Q63HN8 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
RNF213Q63HN8 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC10.23□□□□□ -0.77
RNF213Q63HN8 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC10.23□□□□□ -0.77
RNF213Q63HN8 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC10.23□□□□□ -0.77
RNF213Q63HN8 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC10.23□□□□□ -0.77
RNF213Q63HN8 AC040169.1-201ENST00000565382 521 ntBASIC10.23□□□□□ -0.77
RNF213Q63HN8 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
RNF213Q63HN8 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC10.23□□□□□ -0.77
RNF213Q63HN8 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
RNF213Q63HN8 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC10.23□□□□□ -0.77
RNF213Q63HN8 ILF2-202ENST00000368681 726 ntTSL 2 BASIC10.23□□□□□ -0.77
RNF213Q63HN8 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
RNF213Q63HN8 PMP22-202ENST00000395936 816 ntTSL 3 BASIC10.23□□□□□ -0.77
RNF213Q63HN8 AC012640.2-201ENST00000561606 901 ntBASIC10.23□□□□□ -0.77
RNF213Q63HN8 BNIP3P18-201ENST00000593976 575 ntBASIC10.23□□□□□ -0.77
RNF213Q63HN8 KRT8P20-201ENST00000423953 1409 ntBASIC10.23□□□□□ -0.77
RNF213Q63HN8 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
RNF213Q63HN8 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
RNF213Q63HN8 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC10.23□□□□□ -0.77
RNF213Q63HN8 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
RNF213Q63HN8 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC10.23□□□□□ -0.77
RNF213Q63HN8 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
RNF213Q63HN8 HIST2H3DP1-201ENST00000401004 416 ntBASIC10.23□□□□□ -0.77
RNF213Q63HN8 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
RNF213Q63HN8 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC10.23□□□□□ -0.77
RNF213Q63HN8 Z69720.1-201ENST00000601483 472 ntBASIC10.23□□□□□ -0.77
RNF213Q63HN8 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
RNF213Q63HN8 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC10.23□□□□□ -0.77
RNF213Q63HN8 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC10.23□□□□□ -0.77
RNF213Q63HN8 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
RNF213Q63HN8 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
RNF213Q63HN8 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC10.23□□□□□ -0.77
RNF213Q63HN8 STAC-204ENST00000457375 1366 ntTSL 2 BASIC10.23□□□□□ -0.77
RNF213Q63HN8 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC10.22□□□□□ -0.77
RNF213Q63HN8 BUB3-202ENST00000368859 667 ntTSL 3 BASIC10.22□□□□□ -0.77
RNF213Q63HN8 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
RNF213Q63HN8 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC10.22□□□□□ -0.77
RNF213Q63HN8 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC10.22□□□□□ -0.77
RNF213Q63HN8 AC023274.1-201ENST00000418278 595 ntBASIC10.22□□□□□ -0.77
RNF213Q63HN8 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
RNF213Q63HN8 LITAF-220ENST00000620789 692 ntTSL 5 BASIC10.22□□□□□ -0.77
RNF213Q63HN8 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC10.22□□□□□ -0.77
RNF213Q63HN8 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms