Protein–RNA interactions for Protein: Q29RF7

PDS5A, Sister chromatid cohesion protein PDS5 homolog A, humanhuman

Known RBP Predictions only

Length 1,337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDS5AQ29RF7 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC23■■□□□ 1.27
PDS5AQ29RF7 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC23■■□□□ 1.27
PDS5AQ29RF7 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
PDS5AQ29RF7 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC23■■□□□ 1.27
PDS5AQ29RF7 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC23■■□□□ 1.27
PDS5AQ29RF7 HOMER2P1-201ENST00000455653 964 ntBASIC23■■□□□ 1.27
PDS5AQ29RF7 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC23■■□□□ 1.27
PDS5AQ29RF7 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC23■■□□□ 1.27
PDS5AQ29RF7 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC23■■□□□ 1.27
PDS5AQ29RF7 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
PDS5AQ29RF7 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC22.99■■□□□ 1.27
PDS5AQ29RF7 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
PDS5AQ29RF7 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
PDS5AQ29RF7 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC22.99■■□□□ 1.27
PDS5AQ29RF7 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
PDS5AQ29RF7 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
PDS5AQ29RF7 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
PDS5AQ29RF7 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC22.99■■□□□ 1.27
PDS5AQ29RF7 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC22.99■■□□□ 1.27
PDS5AQ29RF7 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC22.99■■□□□ 1.27
PDS5AQ29RF7 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC22.99■■□□□ 1.27
PDS5AQ29RF7 AL441883.1-201ENST00000566170 1045 ntBASIC22.99■■□□□ 1.27
PDS5AQ29RF7 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC22.99■■□□□ 1.27
PDS5AQ29RF7 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
PDS5AQ29RF7 CR769767.2-201ENST00000622735 460 ntBASIC22.99■■□□□ 1.27
PDS5AQ29RF7 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
PDS5AQ29RF7 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC22.99■■□□□ 1.27
PDS5AQ29RF7 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC22.99■■□□□ 1.27
PDS5AQ29RF7 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC22.99■■□□□ 1.27
PDS5AQ29RF7 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
PDS5AQ29RF7 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
PDS5AQ29RF7 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
PDS5AQ29RF7 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC22.98■■□□□ 1.27
PDS5AQ29RF7 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
PDS5AQ29RF7 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
PDS5AQ29RF7 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC22.98■■□□□ 1.27
PDS5AQ29RF7 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC22.98■■□□□ 1.27
PDS5AQ29RF7 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC22.98■■□□□ 1.27
PDS5AQ29RF7 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
PDS5AQ29RF7 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC22.98■■□□□ 1.27
PDS5AQ29RF7 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC22.98■■□□□ 1.27
PDS5AQ29RF7 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC22.98■■□□□ 1.27
PDS5AQ29RF7 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
PDS5AQ29RF7 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
PDS5AQ29RF7 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
PDS5AQ29RF7 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
PDS5AQ29RF7 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC22.98■■□□□ 1.27
PDS5AQ29RF7 AC009947.2-201ENST00000444014 672 ntBASIC22.98■■□□□ 1.27
PDS5AQ29RF7 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC22.98■■□□□ 1.27
PDS5AQ29RF7 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
PDS5AQ29RF7 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC22.98■■□□□ 1.27
PDS5AQ29RF7 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
PDS5AQ29RF7 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC22.98■■□□□ 1.27
PDS5AQ29RF7 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC22.98■■□□□ 1.27
PDS5AQ29RF7 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC22.98■■□□□ 1.27
PDS5AQ29RF7 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
PDS5AQ29RF7 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC22.97■■□□□ 1.27
PDS5AQ29RF7 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
PDS5AQ29RF7 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC22.97■■□□□ 1.27
PDS5AQ29RF7 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
PDS5AQ29RF7 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
PDS5AQ29RF7 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC22.97■■□□□ 1.27
PDS5AQ29RF7 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
PDS5AQ29RF7 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
PDS5AQ29RF7 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
PDS5AQ29RF7 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
PDS5AQ29RF7 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
PDS5AQ29RF7 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC22.97■■□□□ 1.27
PDS5AQ29RF7 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC22.97■■□□□ 1.27
PDS5AQ29RF7 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC22.97■■□□□ 1.27
PDS5AQ29RF7 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
PDS5AQ29RF7 AL023973.1-201ENST00000624619 620 ntBASIC22.97■■□□□ 1.27
PDS5AQ29RF7 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
PDS5AQ29RF7 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
PDS5AQ29RF7 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC22.97■■□□□ 1.27
PDS5AQ29RF7 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC22.97■■□□□ 1.27
PDS5AQ29RF7 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC22.97■■□□□ 1.27
PDS5AQ29RF7 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
PDS5AQ29RF7 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC22.97■■□□□ 1.27
PDS5AQ29RF7 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC22.97■■□□□ 1.27
PDS5AQ29RF7 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC22.96■■□□□ 1.27
PDS5AQ29RF7 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC22.96■■□□□ 1.27
PDS5AQ29RF7 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC22.96■■□□□ 1.27
PDS5AQ29RF7 ME2-218ENST00000640965 2476 ntTSL 5 BASIC22.96■■□□□ 1.27
PDS5AQ29RF7 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
PDS5AQ29RF7 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC22.96■■□□□ 1.27
PDS5AQ29RF7 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC22.96■■□□□ 1.27
PDS5AQ29RF7 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
PDS5AQ29RF7 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
PDS5AQ29RF7 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC22.96■■□□□ 1.27
PDS5AQ29RF7 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC22.96■■□□□ 1.27
PDS5AQ29RF7 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
PDS5AQ29RF7 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC22.96■■□□□ 1.27
PDS5AQ29RF7 GPAT2P1-201ENST00000444924 1672 ntBASIC22.96■■□□□ 1.27
PDS5AQ29RF7 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
PDS5AQ29RF7 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC22.95■■□□□ 1.27
PDS5AQ29RF7 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC22.95■■□□□ 1.27
PDS5AQ29RF7 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC22.95■■□□□ 1.26
PDS5AQ29RF7 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC22.95■■□□□ 1.26
PDS5AQ29RF7 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms