Protein–RNA interactions for Protein: Q12766

HMGXB3, HMG domain-containing protein 3, humanhuman

Predictions only

Length 1,538 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3Q12766 AC009237.14-201ENST00000609975 1594 ntBASIC33.78■■■■□ 3
HMGXB3Q12766 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC33.78■■■■□ 3
HMGXB3Q12766 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC33.78■■■■□ 3
HMGXB3Q12766 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC33.78■■■■□ 3
HMGXB3Q12766 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC33.78■■■■□ 3
HMGXB3Q12766 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC33.78■■■■□ 3
HMGXB3Q12766 IGHV3OR16-7-201ENST00000604106 360 ntBASIC33.78■■■■□ 3
HMGXB3Q12766 MIR7706-201ENST00000613747 67 ntBASIC33.78■■■■□ 3
HMGXB3Q12766 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC33.78■■■■□ 3
HMGXB3Q12766 AC104417.2-201ENST00000562989 1793 ntBASIC33.78■■■■□ 3
HMGXB3Q12766 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC33.77■■■■□ 3
HMGXB3Q12766 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC33.77■■■■□ 3
HMGXB3Q12766 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC33.77■■■■□ 3
HMGXB3Q12766 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC33.77■■■■□ 3
HMGXB3Q12766 GRAMD4P1-201ENST00000435181 1110 ntBASIC33.77■■■■□ 3
HMGXB3Q12766 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC33.77■■■■□ 3
HMGXB3Q12766 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC33.77■■■■□ 3
HMGXB3Q12766 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC33.77■■■■□ 3
HMGXB3Q12766 AF106564.1-201ENST00000607058 2553 ntBASIC33.76■■■■□ 3
HMGXB3Q12766 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC33.76■■■■□ 3
HMGXB3Q12766 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC33.76■■■■□ 3
HMGXB3Q12766 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC33.76■■■■□ 3
HMGXB3Q12766 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC33.76■■■■□ 3
HMGXB3Q12766 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC33.76■■■■□ 3
HMGXB3Q12766 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC33.76■■■■□ 3
HMGXB3Q12766 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC33.76■■■■□ 3
HMGXB3Q12766 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC33.76■■■■□ 3
HMGXB3Q12766 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC33.76■■■■□ 3
HMGXB3Q12766 FICD-205ENST00000552758 603 ntTSL 2 BASIC33.76■■■■□ 3
HMGXB3Q12766 TPM1-218ENST00000559281 851 ntTSL 5 BASIC33.76■■■■□ 3
HMGXB3Q12766 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC33.76■■■■□ 3
HMGXB3Q12766 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC33.76■■■■□ 3
HMGXB3Q12766 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC33.76■■■■□ 3
HMGXB3Q12766 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC33.76■■■□□ 2.99
HMGXB3Q12766 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC33.76■■■□□ 2.99
HMGXB3Q12766 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC33.76■■■□□ 2.99
HMGXB3Q12766 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC33.76■■■□□ 2.99
HMGXB3Q12766 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC33.76■■■□□ 2.99
HMGXB3Q12766 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC33.76■■■□□ 2.99
HMGXB3Q12766 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC33.76■■■□□ 2.99
HMGXB3Q12766 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC33.76■■■□□ 2.99
HMGXB3Q12766 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC33.76■■■□□ 2.99
HMGXB3Q12766 WWC2-AS2-201ENST00000578387 2183 ntBASIC33.75■■■□□ 2.99
HMGXB3Q12766 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC33.75■■■□□ 2.99
HMGXB3Q12766 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC33.75■■■□□ 2.99
HMGXB3Q12766 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC33.75■■■□□ 2.99
HMGXB3Q12766 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC33.75■■■□□ 2.99
HMGXB3Q12766 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC33.75■■■□□ 2.99
HMGXB3Q12766 TLE1-202ENST00000376484 666 ntTSL 3 BASIC33.75■■■□□ 2.99
HMGXB3Q12766 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC33.75■■■□□ 2.99
HMGXB3Q12766 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC33.75■■■□□ 2.99
HMGXB3Q12766 AC090616.6-201ENST00000582640 721 ntBASIC33.75■■■□□ 2.99
HMGXB3Q12766 TEN1-204ENST00000588202 862 ntTSL 3 BASIC33.75■■■□□ 2.99
HMGXB3Q12766 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC33.75■■■□□ 2.99
HMGXB3Q12766 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC33.75■■■□□ 2.99
HMGXB3Q12766 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC33.75■■■□□ 2.99
HMGXB3Q12766 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC33.74■■■□□ 2.99
HMGXB3Q12766 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC33.74■■■□□ 2.99
HMGXB3Q12766 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC33.74■■■□□ 2.99
HMGXB3Q12766 AC112497.1-201ENST00000624824 639 ntBASIC33.74■■■□□ 2.99
HMGXB3Q12766 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC33.74■■■□□ 2.99
HMGXB3Q12766 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC33.74■■■□□ 2.99
HMGXB3Q12766 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC33.74■■■□□ 2.99
HMGXB3Q12766 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC33.74■■■□□ 2.99
HMGXB3Q12766 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC33.74■■■□□ 2.99
HMGXB3Q12766 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC33.74■■■□□ 2.99
HMGXB3Q12766 AF238378.1-201ENST00000526806 358 ntBASIC33.74■■■□□ 2.99
HMGXB3Q12766 KRT18P58-201ENST00000527480 1120 ntBASIC33.74■■■□□ 2.99
HMGXB3Q12766 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC33.74■■■□□ 2.99
HMGXB3Q12766 AL592071.1-201ENST00000611956 408 ntBASIC33.74■■■□□ 2.99
HMGXB3Q12766 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC33.74■■■□□ 2.99
HMGXB3Q12766 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC33.73■■■□□ 2.99
HMGXB3Q12766 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC33.73■■■□□ 2.99
HMGXB3Q12766 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC33.73■■■□□ 2.99
HMGXB3Q12766 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC33.73■■■□□ 2.99
HMGXB3Q12766 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC33.73■■■□□ 2.99
HMGXB3Q12766 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC33.73■■■□□ 2.99
HMGXB3Q12766 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC33.73■■■□□ 2.99
HMGXB3Q12766 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC33.73■■■□□ 2.99
HMGXB3Q12766 Z69720.1-201ENST00000601483 472 ntBASIC33.73■■■□□ 2.99
HMGXB3Q12766 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC33.73■■■□□ 2.99
HMGXB3Q12766 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC33.73■■■□□ 2.99
HMGXB3Q12766 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC33.72■■■□□ 2.99
HMGXB3Q12766 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC33.72■■■□□ 2.99
HMGXB3Q12766 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC33.72■■■□□ 2.99
HMGXB3Q12766 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC33.72■■■□□ 2.99
HMGXB3Q12766 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC33.72■■■□□ 2.99
HMGXB3Q12766 MIR1233-2-201ENST00000408138 82 ntBASIC33.72■■■□□ 2.99
HMGXB3Q12766 MIR1233-1-201ENST00000408722 82 ntBASIC33.72■■■□□ 2.99
HMGXB3Q12766 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC33.72■■■□□ 2.99
HMGXB3Q12766 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC33.72■■■□□ 2.99
HMGXB3Q12766 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC33.72■■■□□ 2.99
HMGXB3Q12766 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC33.72■■■□□ 2.99
HMGXB3Q12766 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC33.72■■■□□ 2.99
HMGXB3Q12766 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC33.72■■■□□ 2.99
HMGXB3Q12766 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC33.72■■■□□ 2.99
HMGXB3Q12766 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC33.71■■■□□ 2.99
HMGXB3Q12766 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC33.71■■■□□ 2.99
HMGXB3Q12766 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC33.71■■■□□ 2.99
HMGXB3Q12766 DFFB-203ENST00000341385 572 ntTSL 5 BASIC33.71■■■□□ 2.99
Retrieved 100 of 98,524 protein–RNA pairs in 63.1 ms