Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
HIST1H1AQ02539 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
HIST1H1AQ02539 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
HIST1H1AQ02539 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
HIST1H1AQ02539 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC14.65□□□□□ -0.06
HIST1H1AQ02539 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
HIST1H1AQ02539 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC14.65□□□□□ -0.06
HIST1H1AQ02539 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
HIST1H1AQ02539 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
HIST1H1AQ02539 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
HIST1H1AQ02539 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
HIST1H1AQ02539 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC14.64□□□□□ -0.07
HIST1H1AQ02539 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
HIST1H1AQ02539 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
HIST1H1AQ02539 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
HIST1H1AQ02539 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC14.64□□□□□ -0.07
HIST1H1AQ02539 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
HIST1H1AQ02539 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
HIST1H1AQ02539 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
HIST1H1AQ02539 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
HIST1H1AQ02539 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
HIST1H1AQ02539 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
HIST1H1AQ02539 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
HIST1H1AQ02539 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
HIST1H1AQ02539 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
HIST1H1AQ02539 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC14.64□□□□□ -0.07
HIST1H1AQ02539 PPP1R14BP3-201ENST00000509033 445 ntBASIC14.64□□□□□ -0.07
HIST1H1AQ02539 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC14.64□□□□□ -0.07
HIST1H1AQ02539 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC14.64□□□□□ -0.07
HIST1H1AQ02539 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC14.64□□□□□ -0.07
HIST1H1AQ02539 AC005829.2-201ENST00000571422 1056 ntBASIC14.64□□□□□ -0.07
HIST1H1AQ02539 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC14.64□□□□□ -0.07
HIST1H1AQ02539 AC092118.2-201ENST00000613495 667 ntBASIC14.64□□□□□ -0.07
HIST1H1AQ02539 AC006557.6-201ENST00000623071 864 ntBASIC14.64□□□□□ -0.07
HIST1H1AQ02539 PFKL-212ENST00000628044 129 ntTSL 3 BASIC14.64□□□□□ -0.07
HIST1H1AQ02539 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
HIST1H1AQ02539 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC14.64□□□□□ -0.07
HIST1H1AQ02539 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
HIST1H1AQ02539 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC14.64□□□□□ -0.07
HIST1H1AQ02539 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
HIST1H1AQ02539 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC14.64□□□□□ -0.07
HIST1H1AQ02539 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
HIST1H1AQ02539 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
HIST1H1AQ02539 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC14.64□□□□□ -0.07
HIST1H1AQ02539 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC14.64□□□□□ -0.07
HIST1H1AQ02539 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC14.64□□□□□ -0.07
HIST1H1AQ02539 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
HIST1H1AQ02539 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
HIST1H1AQ02539 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
HIST1H1AQ02539 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
HIST1H1AQ02539 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
HIST1H1AQ02539 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
HIST1H1AQ02539 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC14.63□□□□□ -0.07
HIST1H1AQ02539 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
HIST1H1AQ02539 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
HIST1H1AQ02539 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
HIST1H1AQ02539 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
HIST1H1AQ02539 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
HIST1H1AQ02539 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC14.63□□□□□ -0.07
HIST1H1AQ02539 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC14.63□□□□□ -0.07
HIST1H1AQ02539 AC091874.3-201ENST00000512672 1195 ntBASIC14.63□□□□□ -0.07
HIST1H1AQ02539 BET1L-207ENST00000529614 560 ntTSL 5 BASIC14.63□□□□□ -0.07
HIST1H1AQ02539 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC14.63□□□□□ -0.07
HIST1H1AQ02539 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC14.63□□□□□ -0.07
HIST1H1AQ02539 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
HIST1H1AQ02539 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
HIST1H1AQ02539 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC14.63□□□□□ -0.07
HIST1H1AQ02539 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
HIST1H1AQ02539 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC14.63□□□□□ -0.07
HIST1H1AQ02539 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC14.63□□□□□ -0.07
HIST1H1AQ02539 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
HIST1H1AQ02539 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC14.63□□□□□ -0.07
HIST1H1AQ02539 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC14.63□□□□□ -0.07
HIST1H1AQ02539 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
HIST1H1AQ02539 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC14.63□□□□□ -0.07
HIST1H1AQ02539 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC14.63□□□□□ -0.07
HIST1H1AQ02539 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC14.63□□□□□ -0.07
HIST1H1AQ02539 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC14.63□□□□□ -0.07
HIST1H1AQ02539 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
HIST1H1AQ02539 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
HIST1H1AQ02539 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
HIST1H1AQ02539 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
HIST1H1AQ02539 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC14.62□□□□□ -0.07
HIST1H1AQ02539 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
HIST1H1AQ02539 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
HIST1H1AQ02539 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
HIST1H1AQ02539 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
HIST1H1AQ02539 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
HIST1H1AQ02539 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
HIST1H1AQ02539 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
HIST1H1AQ02539 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC14.62□□□□□ -0.07
HIST1H1AQ02539 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
HIST1H1AQ02539 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC14.62□□□□□ -0.07
HIST1H1AQ02539 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC14.62□□□□□ -0.07
HIST1H1AQ02539 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
HIST1H1AQ02539 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC14.62□□□□□ -0.07
HIST1H1AQ02539 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC14.62□□□□□ -0.07
HIST1H1AQ02539 MIR4758-201ENST00000577688 71 ntBASIC14.62□□□□□ -0.07
HIST1H1AQ02539 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC14.62□□□□□ -0.07
HIST1H1AQ02539 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC14.62□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms