Protein–RNA interactions for Protein: Q01850

CDR2, Cerebellar degeneration-related protein 2, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2Q01850 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC20.42■□□□□ 0.86
CDR2Q01850 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC20.42■□□□□ 0.86
CDR2Q01850 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC20.42■□□□□ 0.86
CDR2Q01850 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC20.42■□□□□ 0.86
CDR2Q01850 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
CDR2Q01850 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
CDR2Q01850 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CDR2Q01850 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC20.42■□□□□ 0.86
CDR2Q01850 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CDR2Q01850 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
CDR2Q01850 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC20.42■□□□□ 0.86
CDR2Q01850 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
CDR2Q01850 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CDR2Q01850 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CDR2Q01850 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
CDR2Q01850 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC20.41■□□□□ 0.86
CDR2Q01850 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CDR2Q01850 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC20.41■□□□□ 0.86
CDR2Q01850 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC20.41■□□□□ 0.86
CDR2Q01850 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CDR2Q01850 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
CDR2Q01850 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
CDR2Q01850 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CDR2Q01850 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CDR2Q01850 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC20.41■□□□□ 0.86
CDR2Q01850 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC20.41■□□□□ 0.86
CDR2Q01850 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC20.41■□□□□ 0.86
CDR2Q01850 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC20.41■□□□□ 0.86
CDR2Q01850 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CDR2Q01850 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CDR2Q01850 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC20.41■□□□□ 0.86
CDR2Q01850 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC20.41■□□□□ 0.86
CDR2Q01850 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CDR2Q01850 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CDR2Q01850 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CDR2Q01850 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC20.41■□□□□ 0.86
CDR2Q01850 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
CDR2Q01850 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC20.41■□□□□ 0.86
CDR2Q01850 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CDR2Q01850 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC20.4■□□□□ 0.86
CDR2Q01850 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
CDR2Q01850 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CDR2Q01850 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC20.4■□□□□ 0.86
CDR2Q01850 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CDR2Q01850 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CDR2Q01850 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CDR2Q01850 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CDR2Q01850 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC20.4■□□□□ 0.86
CDR2Q01850 CROCCP3-202ENST00000420820 1947 ntBASIC20.4■□□□□ 0.86
CDR2Q01850 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC20.4■□□□□ 0.86
CDR2Q01850 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC20.4■□□□□ 0.86
CDR2Q01850 TSPY21P-201ENST00000433481 731 ntBASIC20.4■□□□□ 0.86
CDR2Q01850 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
CDR2Q01850 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC20.4■□□□□ 0.86
CDR2Q01850 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CDR2Q01850 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC20.4■□□□□ 0.86
CDR2Q01850 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CDR2Q01850 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC20.4■□□□□ 0.86
CDR2Q01850 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC20.4■□□□□ 0.86
CDR2Q01850 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC20.4■□□□□ 0.86
CDR2Q01850 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC20.4■□□□□ 0.86
CDR2Q01850 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CDR2Q01850 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC20.4■□□□□ 0.86
CDR2Q01850 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC20.4■□□□□ 0.86
CDR2Q01850 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC20.39■□□□□ 0.86
CDR2Q01850 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC20.39■□□□□ 0.86
CDR2Q01850 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC20.39■□□□□ 0.86
CDR2Q01850 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC20.39■□□□□ 0.86
CDR2Q01850 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
CDR2Q01850 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
CDR2Q01850 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
CDR2Q01850 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC20.39■□□□□ 0.85
CDR2Q01850 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
CDR2Q01850 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
CDR2Q01850 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
CDR2Q01850 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC20.39■□□□□ 0.85
CDR2Q01850 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CDR2Q01850 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
CDR2Q01850 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CDR2Q01850 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CDR2Q01850 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC20.39■□□□□ 0.85
CDR2Q01850 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
CDR2Q01850 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
CDR2Q01850 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC20.39■□□□□ 0.85
CDR2Q01850 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CDR2Q01850 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC20.39■□□□□ 0.85
CDR2Q01850 USP39-202ENST00000409025 1946 ntTSL 5 BASIC20.39■□□□□ 0.85
CDR2Q01850 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CDR2Q01850 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CDR2Q01850 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CDR2Q01850 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CDR2Q01850 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC20.38■□□□□ 0.85
CDR2Q01850 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CDR2Q01850 KRT8P41-201ENST00000533985 1514 ntBASIC20.38■□□□□ 0.85
CDR2Q01850 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CDR2Q01850 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CDR2Q01850 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CDR2Q01850 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CDR2Q01850 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CDR2Q01850 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC20.38■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms