Protein–RNA interactions for Protein: P78334

GABRE, Gamma-aminobutyric acid receptor subunit epsilon, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABREP78334 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
GABREP78334 KRT8P11-201ENST00000409686 1436 ntBASIC18.21■□□□□ 0.51
GABREP78334 CD37-204ENST00000535669 1674 ntTSL 2 BASIC18.21■□□□□ 0.51
GABREP78334 ME2-216ENST00000639850 2331 ntTSL 5 BASIC18.21■□□□□ 0.51
GABREP78334 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC18.21■□□□□ 0.51
GABREP78334 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
GABREP78334 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
GABREP78334 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
GABREP78334 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
GABREP78334 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
GABREP78334 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
GABREP78334 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
GABREP78334 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC18.2■□□□□ 0.5
GABREP78334 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
GABREP78334 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC18.2■□□□□ 0.5
GABREP78334 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC18.2■□□□□ 0.5
GABREP78334 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC18.2■□□□□ 0.5
GABREP78334 PRR29-207ENST00000580752 458 ntTSL 3 BASIC18.2■□□□□ 0.5
GABREP78334 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
GABREP78334 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
GABREP78334 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC18.2■□□□□ 0.5
GABREP78334 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
GABREP78334 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
GABREP78334 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
GABREP78334 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
GABREP78334 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC18.2■□□□□ 0.5
GABREP78334 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
GABREP78334 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
GABREP78334 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC18.19■□□□□ 0.5
GABREP78334 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
GABREP78334 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
GABREP78334 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
GABREP78334 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
GABREP78334 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
GABREP78334 FEM1AP1-201ENST00000431297 1995 ntBASIC18.19■□□□□ 0.5
GABREP78334 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
GABREP78334 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
GABREP78334 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC18.19■□□□□ 0.5
GABREP78334 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
GABREP78334 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC18.19■□□□□ 0.5
GABREP78334 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
GABREP78334 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC18.19■□□□□ 0.5
GABREP78334 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
GABREP78334 TSPY21P-201ENST00000433481 731 ntBASIC18.19■□□□□ 0.5
GABREP78334 TSPY23P-201ENST00000440136 739 ntBASIC18.19■□□□□ 0.5
GABREP78334 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
GABREP78334 MOK-225ENST00000522867 1883 ntTSL 5 BASIC18.19■□□□□ 0.5
GABREP78334 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC18.19■□□□□ 0.5
GABREP78334 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC18.19■□□□□ 0.5
GABREP78334 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
GABREP78334 MIR3652-201ENST00000579335 131 ntBASIC18.19■□□□□ 0.5
GABREP78334 KLK8-205ENST00000593490 267 ntTSL 3 BASIC18.19■□□□□ 0.5
GABREP78334 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC18.19■□□□□ 0.5
GABREP78334 NPAP1P7-201ENST00000613027 823 ntBASIC18.19■□□□□ 0.5
GABREP78334 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
GABREP78334 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
GABREP78334 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC18.19■□□□□ 0.5
GABREP78334 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC18.19■□□□□ 0.5
GABREP78334 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
GABREP78334 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
GABREP78334 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
GABREP78334 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
GABREP78334 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
GABREP78334 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
GABREP78334 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
GABREP78334 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
GABREP78334 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
GABREP78334 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
GABREP78334 BUB3-202ENST00000368859 667 ntTSL 3 BASIC18.18■□□□□ 0.5
GABREP78334 GAD2-202ENST00000376248 680 ntTSL 5 BASIC18.18■□□□□ 0.5
GABREP78334 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
GABREP78334 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC18.18■□□□□ 0.5
GABREP78334 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC18.18■□□□□ 0.5
GABREP78334 CNP-204ENST00000472031 1019 ntTSL 2 BASIC18.18■□□□□ 0.5
GABREP78334 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC18.18■□□□□ 0.5
GABREP78334 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC18.18■□□□□ 0.5
GABREP78334 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
GABREP78334 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
GABREP78334 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
GABREP78334 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
GABREP78334 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
GABREP78334 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
GABREP78334 GOLGA2P11-201ENST00000562660 1621 ntBASIC18.18■□□□□ 0.5
GABREP78334 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
GABREP78334 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC18.17■□□□□ 0.5
GABREP78334 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
GABREP78334 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
GABREP78334 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
GABREP78334 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC18.17■□□□□ 0.5
GABREP78334 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
GABREP78334 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
GABREP78334 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC18.17■□□□□ 0.5
GABREP78334 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
GABREP78334 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC18.17■□□□□ 0.5
GABREP78334 AL645929.1-201ENST00000420084 975 ntBASIC18.17■□□□□ 0.5
GABREP78334 AC246785.2-201ENST00000432512 513 ntBASIC18.17■□□□□ 0.5
GABREP78334 SPDYE13P-201ENST00000445314 798 ntBASIC18.17■□□□□ 0.5
GABREP78334 SDHD-206ENST00000528182 754 ntTSL 3 BASIC18.17■□□□□ 0.5
GABREP78334 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC18.17■□□□□ 0.5
GABREP78334 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms