Protein–RNA interactions for Protein: P61020

RAB5B, Ras-related protein Rab-5B, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5BP61020 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
RAB5BP61020 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
RAB5BP61020 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
RAB5BP61020 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC15.04■□□□□ -0
RAB5BP61020 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
RAB5BP61020 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC15.04■□□□□ -0
RAB5BP61020 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC15.04■□□□□ -0
RAB5BP61020 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
RAB5BP61020 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
RAB5BP61020 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
RAB5BP61020 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
RAB5BP61020 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC15.04■□□□□ -0
RAB5BP61020 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
RAB5BP61020 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
RAB5BP61020 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
RAB5BP61020 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
RAB5BP61020 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
RAB5BP61020 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
RAB5BP61020 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC15.03■□□□□ -0
RAB5BP61020 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC15.03■□□□□ -0
RAB5BP61020 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC15.03■□□□□ -0
RAB5BP61020 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
RAB5BP61020 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
RAB5BP61020 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
RAB5BP61020 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC15.03■□□□□ -0
RAB5BP61020 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
RAB5BP61020 AC005703.6-201ENST00000623265 1329 ntBASIC15.03■□□□□ -0
RAB5BP61020 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
RAB5BP61020 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
RAB5BP61020 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC15.03■□□□□ -0
RAB5BP61020 SPCS2P3-201ENST00000500401 656 ntBASIC15.03■□□□□ -0
RAB5BP61020 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
RAB5BP61020 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC15.03■□□□□ -0
RAB5BP61020 AC011676.5-201ENST00000624864 2660 ntBASIC15.03■□□□□ -0
RAB5BP61020 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
RAB5BP61020 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC15.03■□□□□ -0
RAB5BP61020 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC15.03■□□□□ -0
RAB5BP61020 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
RAB5BP61020 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
RAB5BP61020 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
RAB5BP61020 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
RAB5BP61020 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC15.03■□□□□ -0
RAB5BP61020 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
RAB5BP61020 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC15.02■□□□□ -0
RAB5BP61020 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
RAB5BP61020 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC15.02■□□□□ -0
RAB5BP61020 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
RAB5BP61020 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
RAB5BP61020 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
RAB5BP61020 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
RAB5BP61020 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC15.02■□□□□ -0
RAB5BP61020 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
RAB5BP61020 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC15.02■□□□□ -0
RAB5BP61020 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC15.02■□□□□ -0
RAB5BP61020 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
RAB5BP61020 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC15.02■□□□□ -0
RAB5BP61020 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC15.02■□□□□ -0
RAB5BP61020 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
RAB5BP61020 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
RAB5BP61020 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC15.02■□□□□ -0
RAB5BP61020 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
RAB5BP61020 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
RAB5BP61020 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
RAB5BP61020 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
RAB5BP61020 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
RAB5BP61020 HYI-210ENST00000486909 905 ntTSL 5 BASIC15.02■□□□□ -0
RAB5BP61020 MIR4281-201ENST00000580852 62 ntBASIC15.02■□□□□ -0
RAB5BP61020 SRP68-213ENST00000629930 165 ntTSL 5 BASIC15.02■□□□□ -0
RAB5BP61020 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC15.02□□□□□ -0.01
RAB5BP61020 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
RAB5BP61020 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
RAB5BP61020 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC15.02□□□□□ -0.01
RAB5BP61020 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
RAB5BP61020 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC15.02□□□□□ -0.01
RAB5BP61020 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
RAB5BP61020 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC15.02□□□□□ -0.01
RAB5BP61020 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
RAB5BP61020 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
RAB5BP61020 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
RAB5BP61020 AL645608.8-201ENST00000606034 2086 ntBASIC15.02□□□□□ -0.01
RAB5BP61020 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC15.02□□□□□ -0.01
RAB5BP61020 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
RAB5BP61020 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC15.02□□□□□ -0.01
RAB5BP61020 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
RAB5BP61020 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
RAB5BP61020 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
RAB5BP61020 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
RAB5BP61020 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC15.01□□□□□ -0.01
RAB5BP61020 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC15.01□□□□□ -0.01
RAB5BP61020 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
RAB5BP61020 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC15.01□□□□□ -0.01
RAB5BP61020 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
RAB5BP61020 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
RAB5BP61020 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
RAB5BP61020 STAC-204ENST00000457375 1366 ntTSL 2 BASIC15.01□□□□□ -0.01
RAB5BP61020 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
RAB5BP61020 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC15.01□□□□□ -0.01
RAB5BP61020 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
RAB5BP61020 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC15.01□□□□□ -0.01
RAB5BP61020 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms