Protein–RNA interactions for Protein: P60842

EIF4A1, Eukaryotic initiation factor 4A-I, humanhuman

Known RBP Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EIF4A1P60842 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
EIF4A1P60842 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
EIF4A1P60842 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
EIF4A1P60842 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC24.53■■□□□ 1.52
EIF4A1P60842 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC24.53■■□□□ 1.52
EIF4A1P60842 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC24.53■■□□□ 1.52
EIF4A1P60842 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
EIF4A1P60842 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC24.53■■□□□ 1.52
EIF4A1P60842 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC24.53■■□□□ 1.52
EIF4A1P60842 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
EIF4A1P60842 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
EIF4A1P60842 AL158211.5-201ENST00000623583 2518 ntBASIC24.53■■□□□ 1.52
EIF4A1P60842 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC24.52■■□□□ 1.52
EIF4A1P60842 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC24.52■■□□□ 1.52
EIF4A1P60842 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC24.52■■□□□ 1.52
EIF4A1P60842 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC24.52■■□□□ 1.52
EIF4A1P60842 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
EIF4A1P60842 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC24.52■■□□□ 1.52
EIF4A1P60842 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC24.52■■□□□ 1.52
EIF4A1P60842 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC24.52■■□□□ 1.52
EIF4A1P60842 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
EIF4A1P60842 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC24.52■■□□□ 1.52
EIF4A1P60842 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
EIF4A1P60842 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC24.52■■□□□ 1.52
EIF4A1P60842 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC24.52■■□□□ 1.52
EIF4A1P60842 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC24.52■■□□□ 1.52
EIF4A1P60842 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
EIF4A1P60842 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
EIF4A1P60842 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC24.51■■□□□ 1.51
EIF4A1P60842 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC24.51■■□□□ 1.51
EIF4A1P60842 Telomerase-vert.1-201ENST00000363312 438 ntBASIC24.51■■□□□ 1.51
EIF4A1P60842 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC24.51■■□□□ 1.51
EIF4A1P60842 AC087388.1-201ENST00000571370 1112 ntBASIC24.51■■□□□ 1.51
EIF4A1P60842 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC24.51■■□□□ 1.51
EIF4A1P60842 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC24.51■■□□□ 1.51
EIF4A1P60842 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC24.51■■□□□ 1.51
EIF4A1P60842 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
EIF4A1P60842 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC24.51■■□□□ 1.51
EIF4A1P60842 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
EIF4A1P60842 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC24.5■■□□□ 1.51
EIF4A1P60842 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC24.5■■□□□ 1.51
EIF4A1P60842 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
EIF4A1P60842 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC24.5■■□□□ 1.51
EIF4A1P60842 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
EIF4A1P60842 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
EIF4A1P60842 ANKRD20A18P-201ENST00000359341 492 ntBASIC24.5■■□□□ 1.51
EIF4A1P60842 SAPCD2P2-201ENST00000431719 1174 ntBASIC24.5■■□□□ 1.51
EIF4A1P60842 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
EIF4A1P60842 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC24.5■■□□□ 1.51
EIF4A1P60842 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
EIF4A1P60842 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC24.5■■□□□ 1.51
EIF4A1P60842 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
EIF4A1P60842 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
EIF4A1P60842 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC24.5■■□□□ 1.51
EIF4A1P60842 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC24.5■■□□□ 1.51
EIF4A1P60842 POLI-202ENST00000406285 2030 ntTSL 2 BASIC24.49■■□□□ 1.51
EIF4A1P60842 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC24.49■■□□□ 1.51
EIF4A1P60842 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC24.49■■□□□ 1.51
EIF4A1P60842 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
EIF4A1P60842 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC24.49■■□□□ 1.51
EIF4A1P60842 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
EIF4A1P60842 AC009947.2-201ENST00000444014 672 ntBASIC24.49■■□□□ 1.51
EIF4A1P60842 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC24.49■■□□□ 1.51
EIF4A1P60842 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC24.49■■□□□ 1.51
EIF4A1P60842 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
EIF4A1P60842 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC24.49■■□□□ 1.51
EIF4A1P60842 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
EIF4A1P60842 ETFA-216ENST00000560726 942 ntTSL 3 BASIC24.49■■□□□ 1.51
EIF4A1P60842 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
EIF4A1P60842 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
EIF4A1P60842 CR769767.2-201ENST00000622735 460 ntBASIC24.49■■□□□ 1.51
EIF4A1P60842 AL031432.5-201ENST00000641059 760 ntBASIC24.49■■□□□ 1.51
EIF4A1P60842 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
EIF4A1P60842 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
EIF4A1P60842 GPAT2P1-201ENST00000444924 1672 ntBASIC24.49■■□□□ 1.51
EIF4A1P60842 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC24.49■■□□□ 1.51
EIF4A1P60842 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
EIF4A1P60842 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC24.48■■□□□ 1.51
EIF4A1P60842 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
EIF4A1P60842 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
EIF4A1P60842 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC24.48■■□□□ 1.51
EIF4A1P60842 ILF2-202ENST00000368681 726 ntTSL 2 BASIC24.48■■□□□ 1.51
EIF4A1P60842 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC24.48■■□□□ 1.51
EIF4A1P60842 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
EIF4A1P60842 AL031133.1-201ENST00000406807 723 ntBASIC24.48■■□□□ 1.51
EIF4A1P60842 ISCU-203ENST00000431221 799 ntTSL 2 BASIC24.48■■□□□ 1.51
EIF4A1P60842 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
EIF4A1P60842 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC24.48■■□□□ 1.51
EIF4A1P60842 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC24.48■■□□□ 1.51
EIF4A1P60842 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC24.48■■□□□ 1.51
EIF4A1P60842 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC24.48■■□□□ 1.51
EIF4A1P60842 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC24.48■■□□□ 1.51
EIF4A1P60842 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC24.48■■□□□ 1.51
EIF4A1P60842 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC24.48■■□□□ 1.51
EIF4A1P60842 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC24.48■■□□□ 1.51
EIF4A1P60842 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC24.48■■□□□ 1.51
EIF4A1P60842 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC24.48■■□□□ 1.51
EIF4A1P60842 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC24.48■■□□□ 1.51
EIF4A1P60842 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC24.48■■□□□ 1.51
EIF4A1P60842 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC24.48■■□□□ 1.51
Retrieved 100 of 98,524 protein–RNA pairs in 243.3 ms