Protein–RNA interactions for Protein: P53675

CLTCL1, Clathrin heavy chain 2, humanhuman

Predictions only

Length 1,640 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1P53675 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC27.46■■□□□ 1.99
CLTCL1P53675 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC27.46■■□□□ 1.99
CLTCL1P53675 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC27.46■■□□□ 1.99
CLTCL1P53675 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC27.46■■□□□ 1.99
CLTCL1P53675 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC27.46■■□□□ 1.99
CLTCL1P53675 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC27.46■■□□□ 1.99
CLTCL1P53675 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC27.46■■□□□ 1.99
CLTCL1P53675 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC27.46■■□□□ 1.99
CLTCL1P53675 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC27.46■■□□□ 1.99
CLTCL1P53675 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC27.45■■□□□ 1.99
CLTCL1P53675 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC27.45■■□□□ 1.99
CLTCL1P53675 AL023284.2-201ENST00000405850 579 ntBASIC27.45■■□□□ 1.99
CLTCL1P53675 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC27.45■■□□□ 1.99
CLTCL1P53675 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC27.45■■□□□ 1.99
CLTCL1P53675 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC27.45■■□□□ 1.99
CLTCL1P53675 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC27.45■■□□□ 1.99
CLTCL1P53675 TEX21P-204ENST00000641479 1693 ntBASIC27.45■■□□□ 1.98
CLTCL1P53675 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC27.45■■□□□ 1.98
CLTCL1P53675 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC27.45■■□□□ 1.98
CLTCL1P53675 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC27.45■■□□□ 1.98
CLTCL1P53675 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC27.45■■□□□ 1.98
CLTCL1P53675 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC27.45■■□□□ 1.98
CLTCL1P53675 MIR3180-5-201ENST00000583743 153 ntBASIC27.45■■□□□ 1.98
CLTCL1P53675 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC27.45■■□□□ 1.98
CLTCL1P53675 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC27.45■■□□□ 1.98
CLTCL1P53675 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC27.45■■□□□ 1.98
CLTCL1P53675 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC27.45■■□□□ 1.98
CLTCL1P53675 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC27.44■■□□□ 1.98
CLTCL1P53675 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC27.44■■□□□ 1.98
CLTCL1P53675 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC27.44■■□□□ 1.98
CLTCL1P53675 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC27.44■■□□□ 1.98
CLTCL1P53675 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC27.44■■□□□ 1.98
CLTCL1P53675 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC27.44■■□□□ 1.98
CLTCL1P53675 Z82202.1-201ENST00000623446 1880 ntBASIC27.44■■□□□ 1.98
CLTCL1P53675 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC27.44■■□□□ 1.98
CLTCL1P53675 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC27.44■■□□□ 1.98
CLTCL1P53675 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC27.44■■□□□ 1.98
CLTCL1P53675 ATP5G2P1-201ENST00000433580 426 ntBASIC27.44■■□□□ 1.98
CLTCL1P53675 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC27.44■■□□□ 1.98
CLTCL1P53675 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC27.44■■□□□ 1.98
CLTCL1P53675 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC27.44■■□□□ 1.98
CLTCL1P53675 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC27.44■■□□□ 1.98
CLTCL1P53675 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC27.44■■□□□ 1.98
CLTCL1P53675 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC27.44■■□□□ 1.98
CLTCL1P53675 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC27.44■■□□□ 1.98
CLTCL1P53675 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC27.44■■□□□ 1.98
CLTCL1P53675 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC27.43■■□□□ 1.98
CLTCL1P53675 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC27.43■■□□□ 1.98
CLTCL1P53675 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC27.43■■□□□ 1.98
CLTCL1P53675 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC27.43■■□□□ 1.98
CLTCL1P53675 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC27.43■■□□□ 1.98
CLTCL1P53675 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC27.43■■□□□ 1.98
CLTCL1P53675 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC27.43■■□□□ 1.98
CLTCL1P53675 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC27.43■■□□□ 1.98
CLTCL1P53675 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC27.43■■□□□ 1.98
CLTCL1P53675 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC27.43■■□□□ 1.98
CLTCL1P53675 TREX1-205ENST00000625293 1783 ntBASIC27.42■■□□□ 1.98
CLTCL1P53675 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC27.42■■□□□ 1.98
CLTCL1P53675 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC27.42■■□□□ 1.98
CLTCL1P53675 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC27.42■■□□□ 1.98
CLTCL1P53675 AC125437.2-201ENST00000625180 2167 ntBASIC27.42■■□□□ 1.98
CLTCL1P53675 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC27.42■■□□□ 1.98
CLTCL1P53675 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC27.42■■□□□ 1.98
CLTCL1P53675 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC27.42■■□□□ 1.98
CLTCL1P53675 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC27.42■■□□□ 1.98
CLTCL1P53675 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC27.42■■□□□ 1.98
CLTCL1P53675 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC27.42■■□□□ 1.98
CLTCL1P53675 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
CLTCL1P53675 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC27.41■■□□□ 1.98
CLTCL1P53675 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC27.41■■□□□ 1.98
CLTCL1P53675 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
CLTCL1P53675 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
CLTCL1P53675 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC27.41■■□□□ 1.98
CLTCL1P53675 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC27.41■■□□□ 1.98
CLTCL1P53675 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
CLTCL1P53675 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC27.41■■□□□ 1.98
CLTCL1P53675 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
CLTCL1P53675 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC27.41■■□□□ 1.98
CLTCL1P53675 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC27.41■■□□□ 1.98
CLTCL1P53675 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC27.41■■□□□ 1.98
CLTCL1P53675 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
CLTCL1P53675 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC27.41■■□□□ 1.98
CLTCL1P53675 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC27.41■■□□□ 1.98
CLTCL1P53675 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC27.41■■□□□ 1.98
CLTCL1P53675 KRT126P-201ENST00000549467 1181 ntBASIC27.41■■□□□ 1.98
CLTCL1P53675 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC27.4■■□□□ 1.98
CLTCL1P53675 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC27.4■■□□□ 1.98
CLTCL1P53675 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC27.4■■□□□ 1.98
CLTCL1P53675 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
CLTCL1P53675 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC27.4■■□□□ 1.98
CLTCL1P53675 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC27.4■■□□□ 1.98
CLTCL1P53675 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
CLTCL1P53675 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC27.4■■□□□ 1.98
CLTCL1P53675 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC27.4■■□□□ 1.98
CLTCL1P53675 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC27.4■■□□□ 1.98
CLTCL1P53675 NDUFV2-AS1-203ENST00000608008 779 ntBASIC27.4■■□□□ 1.98
CLTCL1P53675 PWWP2AP1-201ENST00000429776 2273 ntBASIC27.4■■□□□ 1.98
CLTCL1P53675 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.98
CLTCL1P53675 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC27.39■■□□□ 1.98
CLTCL1P53675 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC27.39■■□□□ 1.98
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms