Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
RNF144AP50876 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC17.79■□□□□ 0.44
RNF144AP50876 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC17.79■□□□□ 0.44
RNF144AP50876 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC17.79■□□□□ 0.44
RNF144AP50876 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
RNF144AP50876 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC17.79■□□□□ 0.44
RNF144AP50876 MMD2-204ENST00000612910 778 ntTSL 5 BASIC17.79■□□□□ 0.44
RNF144AP50876 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC17.79■□□□□ 0.44
RNF144AP50876 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC17.79■□□□□ 0.44
RNF144AP50876 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RNF144AP50876 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RNF144AP50876 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC17.79■□□□□ 0.44
RNF144AP50876 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RNF144AP50876 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
RNF144AP50876 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RNF144AP50876 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC17.79■□□□□ 0.44
RNF144AP50876 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
RNF144AP50876 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC17.78■□□□□ 0.44
RNF144AP50876 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RNF144AP50876 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RNF144AP50876 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
RNF144AP50876 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
RNF144AP50876 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC17.78■□□□□ 0.44
RNF144AP50876 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
RNF144AP50876 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RNF144AP50876 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RNF144AP50876 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
RNF144AP50876 PRORSD1P-201ENST00000295112 541 ntBASIC17.78■□□□□ 0.44
RNF144AP50876 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
RNF144AP50876 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
RNF144AP50876 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RNF144AP50876 PEX7-202ENST00000367756 680 ntTSL 3 BASIC17.78■□□□□ 0.44
RNF144AP50876 ISG20-202ENST00000379224 540 ntTSL 3 BASIC17.78■□□□□ 0.44
RNF144AP50876 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
RNF144AP50876 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
RNF144AP50876 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC17.78■□□□□ 0.44
RNF144AP50876 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC17.78■□□□□ 0.44
RNF144AP50876 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
RNF144AP50876 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC17.78■□□□□ 0.44
RNF144AP50876 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC17.78■□□□□ 0.44
RNF144AP50876 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC17.78■□□□□ 0.44
RNF144AP50876 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC17.78■□□□□ 0.44
RNF144AP50876 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
RNF144AP50876 ANKRD18DP-204ENST00000455355 1975 ntBASIC17.78■□□□□ 0.44
RNF144AP50876 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
RNF144AP50876 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC17.78■□□□□ 0.44
RNF144AP50876 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC17.78■□□□□ 0.44
RNF144AP50876 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC17.78■□□□□ 0.44
RNF144AP50876 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
RNF144AP50876 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RNF144AP50876 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
RNF144AP50876 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RNF144AP50876 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC17.77■□□□□ 0.44
RNF144AP50876 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC17.77■□□□□ 0.44
RNF144AP50876 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
RNF144AP50876 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
RNF144AP50876 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
RNF144AP50876 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
RNF144AP50876 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
RNF144AP50876 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
RNF144AP50876 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC17.77■□□□□ 0.44
RNF144AP50876 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
RNF144AP50876 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
RNF144AP50876 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
RNF144AP50876 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
RNF144AP50876 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
RNF144AP50876 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC17.77■□□□□ 0.44
RNF144AP50876 RPPH1-201ENST00000516869 333 ntBASIC17.77■□□□□ 0.44
RNF144AP50876 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC17.77■□□□□ 0.44
RNF144AP50876 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC17.77■□□□□ 0.44
RNF144AP50876 AC004264.1-201ENST00000608354 794 ntBASIC17.77■□□□□ 0.44
RNF144AP50876 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC17.77■□□□□ 0.44
RNF144AP50876 AC079416.2-201ENST00000625035 1193 ntBASIC17.77■□□□□ 0.44
RNF144AP50876 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC17.77■□□□□ 0.44
RNF144AP50876 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC17.77■□□□□ 0.44
RNF144AP50876 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
RNF144AP50876 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
RNF144AP50876 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
RNF144AP50876 AL161938.1-201ENST00000569833 2180 ntBASIC17.77■□□□□ 0.43
RNF144AP50876 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.43
RNF144AP50876 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.43
RNF144AP50876 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC17.77■□□□□ 0.43
RNF144AP50876 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
RNF144AP50876 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.43
RNF144AP50876 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC17.77■□□□□ 0.43
RNF144AP50876 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
RNF144AP50876 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RNF144AP50876 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC17.76■□□□□ 0.43
RNF144AP50876 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC17.76■□□□□ 0.43
RNF144AP50876 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RNF144AP50876 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC17.76■□□□□ 0.43
RNF144AP50876 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RNF144AP50876 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RNF144AP50876 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RNF144AP50876 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC17.76■□□□□ 0.43
RNF144AP50876 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RNF144AP50876 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC17.76■□□□□ 0.43
RNF144AP50876 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RNF144AP50876 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC17.76■□□□□ 0.43
RNF144AP50876 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms