Protein–RNA interactions for Protein: P49840

GSK3A, Glycogen synthase kinase-3 alpha, humanhuman

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GSK3AP49840 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
GSK3AP49840 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
GSK3AP49840 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
GSK3AP49840 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
GSK3AP49840 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
GSK3AP49840 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC16.7■□□□□ 0.26
GSK3AP49840 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
GSK3AP49840 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
GSK3AP49840 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
GSK3AP49840 KRT17P3-201ENST00000420566 1262 ntBASIC16.7■□□□□ 0.26
GSK3AP49840 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC16.7■□□□□ 0.26
GSK3AP49840 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
GSK3AP49840 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC16.7■□□□□ 0.26
GSK3AP49840 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
GSK3AP49840 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC16.7■□□□□ 0.26
GSK3AP49840 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC16.7■□□□□ 0.26
GSK3AP49840 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC16.7■□□□□ 0.26
GSK3AP49840 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
GSK3AP49840 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC16.7■□□□□ 0.26
GSK3AP49840 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC16.7■□□□□ 0.26
GSK3AP49840 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC16.7■□□□□ 0.26
GSK3AP49840 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
GSK3AP49840 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC16.7■□□□□ 0.26
GSK3AP49840 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
GSK3AP49840 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
GSK3AP49840 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
GSK3AP49840 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
GSK3AP49840 AC104417.2-201ENST00000562989 1793 ntBASIC16.69■□□□□ 0.26
GSK3AP49840 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC16.69■□□□□ 0.26
GSK3AP49840 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC16.69■□□□□ 0.26
GSK3AP49840 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
GSK3AP49840 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC16.69■□□□□ 0.26
GSK3AP49840 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC16.69■□□□□ 0.26
GSK3AP49840 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC16.69■□□□□ 0.26
GSK3AP49840 Six3os1_6.1-201ENST00000620790 196 ntBASIC16.69■□□□□ 0.26
GSK3AP49840 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
GSK3AP49840 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC16.69■□□□□ 0.26
GSK3AP49840 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
GSK3AP49840 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC16.69■□□□□ 0.26
GSK3AP49840 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
GSK3AP49840 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
GSK3AP49840 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
GSK3AP49840 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
GSK3AP49840 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
GSK3AP49840 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC16.69■□□□□ 0.26
GSK3AP49840 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
GSK3AP49840 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
GSK3AP49840 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
GSK3AP49840 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
GSK3AP49840 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
GSK3AP49840 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC16.68■□□□□ 0.26
GSK3AP49840 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
GSK3AP49840 NBPF21P-201ENST00000425093 1451 ntBASIC16.68■□□□□ 0.26
GSK3AP49840 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC16.68■□□□□ 0.26
GSK3AP49840 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
GSK3AP49840 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
GSK3AP49840 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
GSK3AP49840 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
GSK3AP49840 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
GSK3AP49840 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
GSK3AP49840 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC16.68■□□□□ 0.26
GSK3AP49840 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
GSK3AP49840 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
GSK3AP49840 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC16.68■□□□□ 0.26
GSK3AP49840 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
GSK3AP49840 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC16.68■□□□□ 0.26
GSK3AP49840 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
GSK3AP49840 RHOD-202ENST00000532559 538 ntTSL 3 BASIC16.68■□□□□ 0.26
GSK3AP49840 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC16.68■□□□□ 0.26
GSK3AP49840 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
GSK3AP49840 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC16.68■□□□□ 0.26
GSK3AP49840 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC16.68■□□□□ 0.26
GSK3AP49840 AC069544.1-201ENST00000609399 999 ntBASIC16.68■□□□□ 0.26
GSK3AP49840 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
GSK3AP49840 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC16.68■□□□□ 0.26
GSK3AP49840 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC16.68■□□□□ 0.26
GSK3AP49840 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
GSK3AP49840 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
GSK3AP49840 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
GSK3AP49840 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
GSK3AP49840 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
GSK3AP49840 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
GSK3AP49840 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
GSK3AP49840 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC16.68■□□□□ 0.26
GSK3AP49840 TEX21P-204ENST00000641479 1693 ntBASIC16.68■□□□□ 0.26
GSK3AP49840 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
GSK3AP49840 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
GSK3AP49840 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC16.68■□□□□ 0.26
GSK3AP49840 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
GSK3AP49840 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC16.68■□□□□ 0.26
GSK3AP49840 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
GSK3AP49840 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC16.68■□□□□ 0.26
GSK3AP49840 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
GSK3AP49840 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
GSK3AP49840 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
GSK3AP49840 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
GSK3AP49840 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
GSK3AP49840 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
GSK3AP49840 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC16.67■□□□□ 0.26
GSK3AP49840 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC16.67■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms