Protein–RNA interactions for Protein: P49662

CASP4, Caspase-4, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4P49662 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC20.9■□□□□ 0.94
CASP4P49662 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CASP4P49662 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC20.9■□□□□ 0.94
CASP4P49662 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC20.9■□□□□ 0.94
CASP4P49662 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC20.9■□□□□ 0.94
CASP4P49662 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
CASP4P49662 AL353807.1-201ENST00000427475 662 ntBASIC20.9■□□□□ 0.94
CASP4P49662 PTPA-216ENST00000432651 857 ntTSL 2 BASIC20.9■□□□□ 0.94
CASP4P49662 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC20.9■□□□□ 0.94
CASP4P49662 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC20.9■□□□□ 0.94
CASP4P49662 AC008550.1-201ENST00000511500 884 ntBASIC20.9■□□□□ 0.94
CASP4P49662 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC20.9■□□□□ 0.94
CASP4P49662 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC20.9■□□□□ 0.94
CASP4P49662 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC20.9■□□□□ 0.94
CASP4P49662 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CASP4P49662 AC073195.1-201ENST00000607241 877 ntBASIC20.9■□□□□ 0.94
CASP4P49662 AC131212.4-201ENST00000623606 975 ntBASIC20.9■□□□□ 0.94
CASP4P49662 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC20.9■□□□□ 0.94
CASP4P49662 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC20.9■□□□□ 0.94
CASP4P49662 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
CASP4P49662 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC20.9■□□□□ 0.94
CASP4P49662 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CASP4P49662 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC20.9■□□□□ 0.94
CASP4P49662 UBQLN4P1-201ENST00000461599 1801 ntBASIC20.9■□□□□ 0.94
CASP4P49662 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.94
CASP4P49662 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
CASP4P49662 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
CASP4P49662 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.94
CASP4P49662 KRT16P1-201ENST00000399124 1418 ntBASIC20.89■□□□□ 0.94
CASP4P49662 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
CASP4P49662 AC004408.2-201ENST00000623613 2777 ntBASIC20.89■□□□□ 0.93
CASP4P49662 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CASP4P49662 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CASP4P49662 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC20.89■□□□□ 0.93
CASP4P49662 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
CASP4P49662 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CASP4P49662 BAALC-201ENST00000297574 801 ntTSL 3 BASIC20.89■□□□□ 0.93
CASP4P49662 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
CASP4P49662 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC20.89■□□□□ 0.93
CASP4P49662 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
CASP4P49662 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
CASP4P49662 AC233702.5-201ENST00000584107 538 ntBASIC20.89■□□□□ 0.93
CASP4P49662 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC20.89■□□□□ 0.93
CASP4P49662 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
CASP4P49662 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CASP4P49662 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CASP4P49662 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
CASP4P49662 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC20.89■□□□□ 0.93
CASP4P49662 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
CASP4P49662 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC20.89■□□□□ 0.93
CASP4P49662 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC20.89■□□□□ 0.93
CASP4P49662 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
CASP4P49662 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC20.88■□□□□ 0.93
CASP4P49662 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC20.88■□□□□ 0.93
CASP4P49662 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CASP4P49662 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CASP4P49662 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
CASP4P49662 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC20.88■□□□□ 0.93
CASP4P49662 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CASP4P49662 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC20.88■□□□□ 0.93
CASP4P49662 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC20.88■□□□□ 0.93
CASP4P49662 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
CASP4P49662 AC008040.2-201ENST00000461049 708 ntBASIC20.88■□□□□ 0.93
CASP4P49662 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CASP4P49662 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC20.88■□□□□ 0.93
CASP4P49662 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
CASP4P49662 AC113410.3-201ENST00000623366 203 ntBASIC20.88■□□□□ 0.93
CASP4P49662 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CASP4P49662 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CASP4P49662 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
CASP4P49662 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CASP4P49662 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CASP4P49662 GAS2L1P1-201ENST00000420145 1480 ntBASIC20.88■□□□□ 0.93
CASP4P49662 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CASP4P49662 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CASP4P49662 FEM1AP3-201ENST00000403722 1741 ntBASIC20.87■□□□□ 0.93
CASP4P49662 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC20.87■□□□□ 0.93
CASP4P49662 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC20.87■□□□□ 0.93
CASP4P49662 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
CASP4P49662 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CASP4P49662 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC20.87■□□□□ 0.93
CASP4P49662 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
CASP4P49662 AC091390.4-202ENST00000476426 537 ntBASIC20.87■□□□□ 0.93
CASP4P49662 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC20.87■□□□□ 0.93
CASP4P49662 DET1-205ENST00000558413 583 ntTSL 4 BASIC20.87■□□□□ 0.93
CASP4P49662 GRAP-204ENST00000573099 846 ntTSL 3 BASIC20.87■□□□□ 0.93
CASP4P49662 CD177P1-201ENST00000606252 935 ntBASIC20.87■□□□□ 0.93
CASP4P49662 RCC2P6-201ENST00000526625 1557 ntBASIC20.87■□□□□ 0.93
CASP4P49662 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
CASP4P49662 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CASP4P49662 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CASP4P49662 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
CASP4P49662 AC006333.2-201ENST00000607957 2099 ntBASIC20.87■□□□□ 0.93
CASP4P49662 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CASP4P49662 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CASP4P49662 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CASP4P49662 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CASP4P49662 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
CASP4P49662 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CASP4P49662 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC20.87■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms