Protein–RNA interactions for Protein: P43235

CTSK, Cathepsin K, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSKP43235 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CTSKP43235 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CTSKP43235 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CTSKP43235 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CTSKP43235 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CTSKP43235 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
CTSKP43235 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
CTSKP43235 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC19.07■□□□□ 0.64
CTSKP43235 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
CTSKP43235 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CTSKP43235 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CTSKP43235 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC19.06■□□□□ 0.64
CTSKP43235 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CTSKP43235 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC19.06■□□□□ 0.64
CTSKP43235 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CTSKP43235 CD37-204ENST00000535669 1674 ntTSL 2 BASIC19.06■□□□□ 0.64
CTSKP43235 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CTSKP43235 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC19.06■□□□□ 0.64
CTSKP43235 GXYLT1P6-201ENST00000456472 1187 ntBASIC19.06■□□□□ 0.64
CTSKP43235 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CTSKP43235 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC19.06■□□□□ 0.64
CTSKP43235 AL353719.1-201ENST00000566847 864 ntBASIC19.06■□□□□ 0.64
CTSKP43235 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC19.06■□□□□ 0.64
CTSKP43235 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC19.06■□□□□ 0.64
CTSKP43235 AFG3L1P-217ENST00000557444 2447 ntBASIC19.06■□□□□ 0.64
CTSKP43235 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
CTSKP43235 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC19.06■□□□□ 0.64
CTSKP43235 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC19.06■□□□□ 0.64
CTSKP43235 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
CTSKP43235 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
CTSKP43235 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC19.06■□□□□ 0.64
CTSKP43235 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC19.05■□□□□ 0.64
CTSKP43235 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CTSKP43235 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC19.05■□□□□ 0.64
CTSKP43235 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC19.05■□□□□ 0.64
CTSKP43235 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CTSKP43235 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC19.05■□□□□ 0.64
CTSKP43235 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CTSKP43235 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CTSKP43235 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC19.05■□□□□ 0.64
CTSKP43235 AC092647.4-201ENST00000457211 535 ntBASIC19.05■□□□□ 0.64
CTSKP43235 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC19.05■□□□□ 0.64
CTSKP43235 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
CTSKP43235 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC19.05■□□□□ 0.64
CTSKP43235 USF2-205ENST00000594064 1179 ntTSL 2 BASIC19.05■□□□□ 0.64
CTSKP43235 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CTSKP43235 AP001271.2-201ENST00000624018 1556 ntBASIC19.05■□□□□ 0.64
CTSKP43235 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC19.05■□□□□ 0.64
CTSKP43235 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CTSKP43235 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CTSKP43235 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC19.05■□□□□ 0.64
CTSKP43235 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CTSKP43235 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC19.04■□□□□ 0.64
CTSKP43235 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
CTSKP43235 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CTSKP43235 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CTSKP43235 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CTSKP43235 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC19.04■□□□□ 0.64
CTSKP43235 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CTSKP43235 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
CTSKP43235 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC19.04■□□□□ 0.64
CTSKP43235 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CTSKP43235 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CTSKP43235 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC19.04■□□□□ 0.64
CTSKP43235 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CTSKP43235 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
CTSKP43235 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC19.04■□□□□ 0.64
CTSKP43235 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
CTSKP43235 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC19.04■□□□□ 0.64
CTSKP43235 CA15P1-201ENST00000481698 905 ntBASIC19.04■□□□□ 0.64
CTSKP43235 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CTSKP43235 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CTSKP43235 AL512604.3-201ENST00000569583 964 ntBASIC19.04■□□□□ 0.64
CTSKP43235 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC19.04■□□□□ 0.64
CTSKP43235 AC011558.1-201ENST00000623459 338 ntBASIC19.04■□□□□ 0.64
CTSKP43235 ME2-218ENST00000640965 2476 ntTSL 5 BASIC19.04■□□□□ 0.64
CTSKP43235 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
CTSKP43235 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CTSKP43235 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CTSKP43235 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CTSKP43235 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC19.04■□□□□ 0.64
CTSKP43235 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CTSKP43235 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC19.03■□□□□ 0.64
CTSKP43235 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC19.03■□□□□ 0.64
CTSKP43235 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CTSKP43235 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
CTSKP43235 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CTSKP43235 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CTSKP43235 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CTSKP43235 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC19.03■□□□□ 0.64
CTSKP43235 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CTSKP43235 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CTSKP43235 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC19.03■□□□□ 0.64
CTSKP43235 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC19.03■□□□□ 0.64
CTSKP43235 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC19.03■□□□□ 0.64
CTSKP43235 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CTSKP43235 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
CTSKP43235 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
CTSKP43235 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC19.03■□□□□ 0.64
CTSKP43235 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC19.03■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms