Protein–RNA interactions for Protein: P35900

KRT20, Keratin, type I cytoskeletal 20, humanhuman

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT20P35900 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
KRT20P35900 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC18.19■□□□□ 0.5
KRT20P35900 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
KRT20P35900 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
KRT20P35900 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
KRT20P35900 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC18.19■□□□□ 0.5
KRT20P35900 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
KRT20P35900 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC18.19■□□□□ 0.5
KRT20P35900 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC18.19■□□□□ 0.5
KRT20P35900 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
KRT20P35900 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
KRT20P35900 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC18.18■□□□□ 0.5
KRT20P35900 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
KRT20P35900 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
KRT20P35900 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC18.18■□□□□ 0.5
KRT20P35900 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
KRT20P35900 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
KRT20P35900 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
KRT20P35900 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
KRT20P35900 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC18.18■□□□□ 0.5
KRT20P35900 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
KRT20P35900 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
KRT20P35900 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC18.18■□□□□ 0.5
KRT20P35900 TREX2-204ENST00000370212 861 ntTSL 5 BASIC18.18■□□□□ 0.5
KRT20P35900 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
KRT20P35900 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
KRT20P35900 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
KRT20P35900 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
KRT20P35900 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
KRT20P35900 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC18.18■□□□□ 0.5
KRT20P35900 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC18.18■□□□□ 0.5
KRT20P35900 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
KRT20P35900 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
KRT20P35900 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC18.18■□□□□ 0.5
KRT20P35900 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC18.18■□□□□ 0.5
KRT20P35900 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC18.18■□□□□ 0.5
KRT20P35900 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC18.18■□□□□ 0.5
KRT20P35900 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
KRT20P35900 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
KRT20P35900 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
KRT20P35900 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
KRT20P35900 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
KRT20P35900 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC18.17■□□□□ 0.5
KRT20P35900 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
KRT20P35900 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
KRT20P35900 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC18.17■□□□□ 0.5
KRT20P35900 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
KRT20P35900 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
KRT20P35900 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
KRT20P35900 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
KRT20P35900 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
KRT20P35900 AC073648.6-201ENST00000641589 218 ntBASIC18.17■□□□□ 0.5
KRT20P35900 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
KRT20P35900 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC18.17■□□□□ 0.5
KRT20P35900 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC18.17■□□□□ 0.5
KRT20P35900 AC005082.1-201ENST00000413042 2259 ntBASIC18.17■□□□□ 0.5
KRT20P35900 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC18.17■□□□□ 0.5
KRT20P35900 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC18.17■□□□□ 0.5
KRT20P35900 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
KRT20P35900 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
KRT20P35900 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
KRT20P35900 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
KRT20P35900 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
KRT20P35900 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
KRT20P35900 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
KRT20P35900 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
KRT20P35900 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
KRT20P35900 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
KRT20P35900 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
KRT20P35900 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC18.16■□□□□ 0.5
KRT20P35900 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
KRT20P35900 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
KRT20P35900 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
KRT20P35900 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
KRT20P35900 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
KRT20P35900 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
KRT20P35900 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
KRT20P35900 AC239809.2-201ENST00000415381 517 ntBASIC18.16■□□□□ 0.5
KRT20P35900 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC18.16■□□□□ 0.5
KRT20P35900 AC128676.1-201ENST00000454392 318 ntBASIC18.16■□□□□ 0.5
KRT20P35900 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC18.16■□□□□ 0.5
KRT20P35900 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC18.16■□□□□ 0.5
KRT20P35900 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC18.16■□□□□ 0.5
KRT20P35900 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC18.16■□□□□ 0.5
KRT20P35900 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC18.16■□□□□ 0.5
KRT20P35900 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
KRT20P35900 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
KRT20P35900 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC18.16■□□□□ 0.5
KRT20P35900 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC18.16■□□□□ 0.5
KRT20P35900 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
KRT20P35900 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
KRT20P35900 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
KRT20P35900 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
KRT20P35900 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
KRT20P35900 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
KRT20P35900 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
KRT20P35900 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
KRT20P35900 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC18.15■□□□□ 0.5
KRT20P35900 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
KRT20P35900 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 53.5 ms