Protein–RNA interactions for Protein: P35558

PCK1, Phosphoenolpyruvate carboxykinase, cytosolic [GTP], humanhuman

Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCK1P35558 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC20.15■□□□□ 0.82
PCK1P35558 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
PCK1P35558 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
PCK1P35558 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC20.15■□□□□ 0.82
PCK1P35558 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
PCK1P35558 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC20.15■□□□□ 0.82
PCK1P35558 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
PCK1P35558 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC20.15■□□□□ 0.82
PCK1P35558 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
PCK1P35558 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC20.15■□□□□ 0.82
PCK1P35558 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
PCK1P35558 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
PCK1P35558 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
PCK1P35558 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC20.14■□□□□ 0.82
PCK1P35558 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC20.14■□□□□ 0.82
PCK1P35558 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.82
PCK1P35558 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.82
PCK1P35558 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
PCK1P35558 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
PCK1P35558 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
PCK1P35558 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
PCK1P35558 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
PCK1P35558 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
PCK1P35558 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
PCK1P35558 LY6E-205ENST00000519611 635 ntTSL 3 BASIC20.14■□□□□ 0.81
PCK1P35558 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC20.14■□□□□ 0.81
PCK1P35558 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
PCK1P35558 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
PCK1P35558 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC20.14■□□□□ 0.81
PCK1P35558 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
PCK1P35558 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
PCK1P35558 LINC01465-201ENST00000408887 1940 ntBASIC20.14■□□□□ 0.81
PCK1P35558 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
PCK1P35558 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC20.13■□□□□ 0.81
PCK1P35558 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
PCK1P35558 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
PCK1P35558 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
PCK1P35558 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
PCK1P35558 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
PCK1P35558 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
PCK1P35558 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
PCK1P35558 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
PCK1P35558 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
PCK1P35558 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC20.13■□□□□ 0.81
PCK1P35558 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
PCK1P35558 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
PCK1P35558 KRASP1-201ENST00000407852 552 ntBASIC20.13■□□□□ 0.81
PCK1P35558 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC20.13■□□□□ 0.81
PCK1P35558 KRT16P5-201ENST00000455284 522 ntBASIC20.13■□□□□ 0.81
PCK1P35558 AC006058.3-201ENST00000606217 1069 ntBASIC20.13■□□□□ 0.81
PCK1P35558 AC124016.1-201ENST00000609552 612 ntBASIC20.13■□□□□ 0.81
PCK1P35558 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC20.13■□□□□ 0.81
PCK1P35558 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
PCK1P35558 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
PCK1P35558 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
PCK1P35558 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
PCK1P35558 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
PCK1P35558 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC20.13■□□□□ 0.81
PCK1P35558 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC20.13■□□□□ 0.81
PCK1P35558 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
PCK1P35558 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
PCK1P35558 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC20.13■□□□□ 0.81
PCK1P35558 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
PCK1P35558 AP000974.1-201ENST00000623909 2387 ntBASIC20.13■□□□□ 0.81
PCK1P35558 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
PCK1P35558 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC20.12■□□□□ 0.81
PCK1P35558 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC20.12■□□□□ 0.81
PCK1P35558 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
PCK1P35558 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
PCK1P35558 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC20.12■□□□□ 0.81
PCK1P35558 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
PCK1P35558 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
PCK1P35558 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC20.12■□□□□ 0.81
PCK1P35558 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC20.12■□□□□ 0.81
PCK1P35558 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC20.12■□□□□ 0.81
PCK1P35558 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
PCK1P35558 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
PCK1P35558 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
PCK1P35558 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
PCK1P35558 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
PCK1P35558 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
PCK1P35558 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
PCK1P35558 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC20.12■□□□□ 0.81
PCK1P35558 POU5F1P3-201ENST00000428824 1078 ntBASIC20.12■□□□□ 0.81
PCK1P35558 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC20.12■□□□□ 0.81
PCK1P35558 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC20.12■□□□□ 0.81
PCK1P35558 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
PCK1P35558 DENND3-207ENST00000518347 850 ntTSL 2 BASIC20.12■□□□□ 0.81
PCK1P35558 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
PCK1P35558 MIR4651-201ENST00000582622 73 ntBASIC20.12■□□□□ 0.81
PCK1P35558 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
PCK1P35558 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
PCK1P35558 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC20.12■□□□□ 0.81
PCK1P35558 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC20.12■□□□□ 0.81
PCK1P35558 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC20.12■□□□□ 0.81
PCK1P35558 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
PCK1P35558 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
PCK1P35558 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC20.11■□□□□ 0.81
PCK1P35558 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
PCK1P35558 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC20.11■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms