Protein–RNA interactions for Protein: P30511

HLA-F, HLA class I histocompatibility antigen, alpha chain F, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-FP30511 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
HLA-FP30511 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
HLA-FP30511 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
HLA-FP30511 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC19.47■□□□□ 0.71
HLA-FP30511 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
HLA-FP30511 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
HLA-FP30511 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
HLA-FP30511 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
HLA-FP30511 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
HLA-FP30511 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC19.47■□□□□ 0.71
HLA-FP30511 AL158211.5-201ENST00000623583 2518 ntBASIC19.47■□□□□ 0.71
HLA-FP30511 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
HLA-FP30511 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
HLA-FP30511 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
HLA-FP30511 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
HLA-FP30511 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC19.47■□□□□ 0.71
HLA-FP30511 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC19.47■□□□□ 0.71
HLA-FP30511 AK4P3-201ENST00000418260 669 ntBASIC19.47■□□□□ 0.71
HLA-FP30511 CD70-202ENST00000423145 881 ntTSL 2 BASIC19.47■□□□□ 0.71
HLA-FP30511 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC19.47■□□□□ 0.71
HLA-FP30511 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
HLA-FP30511 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC19.47■□□□□ 0.71
HLA-FP30511 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC19.47■□□□□ 0.71
HLA-FP30511 AC139887.4-201ENST00000607877 719 ntBASIC19.47■□□□□ 0.71
HLA-FP30511 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
HLA-FP30511 AC141257.4-201ENST00000634557 245 ntBASIC19.47■□□□□ 0.71
HLA-FP30511 AC136944.6-201ENST00000634818 245 ntBASIC19.47■□□□□ 0.71
HLA-FP30511 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
HLA-FP30511 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
HLA-FP30511 AFG3L1P-217ENST00000557444 2447 ntBASIC19.47■□□□□ 0.71
HLA-FP30511 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
HLA-FP30511 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC19.47■□□□□ 0.71
HLA-FP30511 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
HLA-FP30511 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC19.47■□□□□ 0.71
HLA-FP30511 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
HLA-FP30511 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
HLA-FP30511 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
HLA-FP30511 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC19.47■□□□□ 0.71
HLA-FP30511 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
HLA-FP30511 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
HLA-FP30511 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
HLA-FP30511 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
HLA-FP30511 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC19.46■□□□□ 0.71
HLA-FP30511 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC19.46■□□□□ 0.71
HLA-FP30511 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC19.46■□□□□ 0.71
HLA-FP30511 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
HLA-FP30511 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC19.46■□□□□ 0.71
HLA-FP30511 Z82202.1-201ENST00000623446 1880 ntBASIC19.46■□□□□ 0.71
HLA-FP30511 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
HLA-FP30511 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
HLA-FP30511 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC19.46■□□□□ 0.71
HLA-FP30511 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC19.46■□□□□ 0.71
HLA-FP30511 LTBR-211ENST00000543190 785 ntTSL 3 BASIC19.46■□□□□ 0.71
HLA-FP30511 WWOX-216ENST00000569818 525 ntBASIC19.46■□□□□ 0.71
HLA-FP30511 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC19.46■□□□□ 0.71
HLA-FP30511 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
HLA-FP30511 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC19.46■□□□□ 0.71
HLA-FP30511 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
HLA-FP30511 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
HLA-FP30511 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC19.46■□□□□ 0.71
HLA-FP30511 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
HLA-FP30511 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
HLA-FP30511 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC19.46■□□□□ 0.71
HLA-FP30511 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
HLA-FP30511 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
HLA-FP30511 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
HLA-FP30511 KRT8P45-201ENST00000414328 1447 ntBASIC19.45■□□□□ 0.7
HLA-FP30511 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
HLA-FP30511 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
HLA-FP30511 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC19.45■□□□□ 0.7
HLA-FP30511 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC19.45■□□□□ 0.7
HLA-FP30511 ARMC10P1-201ENST00000313754 855 ntBASIC19.45■□□□□ 0.7
HLA-FP30511 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
HLA-FP30511 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC19.45■□□□□ 0.7
HLA-FP30511 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
HLA-FP30511 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
HLA-FP30511 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC19.45■□□□□ 0.7
HLA-FP30511 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
HLA-FP30511 GAS2L1P1-201ENST00000420145 1480 ntBASIC19.45■□□□□ 0.7
HLA-FP30511 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
HLA-FP30511 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC19.45■□□□□ 0.7
HLA-FP30511 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
HLA-FP30511 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
HLA-FP30511 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
HLA-FP30511 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC19.44■□□□□ 0.7
HLA-FP30511 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
HLA-FP30511 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
HLA-FP30511 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
HLA-FP30511 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC19.44■□□□□ 0.7
HLA-FP30511 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
HLA-FP30511 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
HLA-FP30511 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC19.44■□□□□ 0.7
HLA-FP30511 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
HLA-FP30511 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC19.44■□□□□ 0.7
HLA-FP30511 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC19.44■□□□□ 0.7
HLA-FP30511 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
HLA-FP30511 AL512604.3-201ENST00000569583 964 ntBASIC19.44■□□□□ 0.7
HLA-FP30511 NT5C-211ENST00000582170 653 ntTSL 3 BASIC19.44■□□□□ 0.7
HLA-FP30511 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC19.44■□□□□ 0.7
HLA-FP30511 NTF6B-201ENST00000591913 560 ntBASIC19.44■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms